Gene Nmar_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1569 
Symbol 
ID5772999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1436416 
End bp1437846 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content37% 
IMG OID641317222 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_001582903 
Protein GI161529077 
COG category[F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAATTCA AAGAAGGATT AACTTTTGAT GATGTTCTTC TTGTACCCAA ATATTCAGAT 
ATTACGAGTA GAAGTCAGAC CGATCTGACC ACAAAATTAT CTCGAAACAT CACAATTAAC
ATCCCCTTTG TGAGTGCAAA TATGGATACT GTTACAGAGT CATCTATGGC TGTAGCTATG
GCTCGTGCTG GAGGAATAGG AATTATTCAT AGATTTTTGA CTATTCAGGA GCAGGCAAAT
GAAGTGCTAA AGGTAAAACG TTCAGGCAGC GTTATGATCG AGAATCCATA TTCTATTTCA
TCAGACAAAT CCATCCAAGA TGCATTAGAT TATGCTGAAG ACAAAGAAAT TTCTGGTTTG
TTAGTTGTTG ATTCAAATTC CAAATTAGTG GGAATTGTCA CTGAAAGAGA TTTACTTTTT
GCTGGTTCAA ACGGAACAAT TGCTGATGTA ATGACAAAGG ATGTTGTTAC TGCAAAACCA
GGTGTATCCT TGGATGAAGC AAAAGACATT TTACATAAAC ACAGAATTGA AAAACTCCCA
ATCGTTGATG ATTCTGGTAT TATACAAGGA TTAATCACTA GTAAGGATAT TACAAATAAT
ACTGATTATC CAAATGCATC TAAAGATAAG AAAGGCAGAC CCTTAGTTGG AGCTGCAGTT
GGTGTCAAAG GTGACTTTTT GGAGAGAAGT GAATCTTTGT TAAATGCAGG TGCTGATGTT
CTTGTTGTTG ATATTGCACA TGGTCATAGT GAAAATGCAA TTAGTACAGT TCGTAACATC
AAGAAAGCAT TTCCTGACTG TGAATTAATA GCTGGAAATA TTGCAACTGC TCAAGGTGCT
GAGGATTTGA TAAAAGCAGG TGTTGATGCA GTAAAGGTTG GTGTTGGTTC TGGTTCAATT
TGTATTACTA GAGTAATTAC TGGTTCAGGT GTTCCACAAT TAACTGCTGT AATGGATTGT
GCAAAAATTG GAAATGATCA TGGAATTCCA ATTATCTCTG ATGGTGGTAC TAGAACATCT
GGTGATGCAA CAAAAGCTCT AGCTGCTGGT GCATCTTCTG TAATGGTTGG AAGTATGCTT
GGTGGAACTG ATGAATCACC TGGTACAGTT TTAACTAAAA ACGGTAAACG TTTCAAAGTA
TATCGTGGAA TGGCTTCTCT TGCAGCCTCA ATTGGTAGAA AATCAAAAGA AACAGGCTCA
ATTTCACTTG AAGATGACCT AAATGACTAT GTTGCAGAAG GAGTTGAAGC TATGGTTCCT
TACAAAGGAA CAGTTACTGA TATTCTAAAA CAACTTGCAG GCGGTGTTCG CTCTGGCTTG
AGTTATTGTG GAGCTCATAC AATTCCGCAA ATGCAACAAA ATGCAGAATT TATCAAAATG
TCAAGAGCTG GATTTGCAGA AAGTCAGCCT CATGATGTTT TATTAATGTA G
 
Protein sequence
MEFKEGLTFD DVLLVPKYSD ITSRSQTDLT TKLSRNITIN IPFVSANMDT VTESSMAVAM 
ARAGGIGIIH RFLTIQEQAN EVLKVKRSGS VMIENPYSIS SDKSIQDALD YAEDKEISGL
LVVDSNSKLV GIVTERDLLF AGSNGTIADV MTKDVVTAKP GVSLDEAKDI LHKHRIEKLP
IVDDSGIIQG LITSKDITNN TDYPNASKDK KGRPLVGAAV GVKGDFLERS ESLLNAGADV
LVVDIAHGHS ENAISTVRNI KKAFPDCELI AGNIATAQGA EDLIKAGVDA VKVGVGSGSI
CITRVITGSG VPQLTAVMDC AKIGNDHGIP IISDGGTRTS GDATKALAAG ASSVMVGSML
GGTDESPGTV LTKNGKRFKV YRGMASLAAS IGRKSKETGS ISLEDDLNDY VAEGVEAMVP
YKGTVTDILK QLAGGVRSGL SYCGAHTIPQ MQQNAEFIKM SRAGFAESQP HDVLLM