Gene Nmar_1564 details

Gene Information

• Locus tag: Nmar_1564
• ID: 5774061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1432780
• End bp: 1433379
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 641317217
• Product: TPR repeat-containing protein
• Protein accession: YP_001582898
• Protein GI: 161529072

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 44
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATGATC CAAAAACAAA TTCAATTTTA GATGAAGGAA ATAGATTATT TTTAAAAGGA 
AAGTACACCG AAGCAATTGC TTATTATGAC AAAATTCTAG ATGAAAACCC AAAACACCTG 
AGTTCTCTTA ACAACAAAGG ATATGCCCTA AGTAAACTAA AGGACTATCA AAGTGCTATG 
AAGTGCTATG ATTTGGCACT TGAAAACTAT CCTGATGATC TTTCTGTGTT GGTAAACAAA 
ATCTCTTCTT TTAGAAAACA AGGAAATCTT TCTGAAGGAT TGTCTATATG TGATAAAATT 
TTAGAGTCTA ATCCAAAATA CAATATTGCG TTATATCACA AGGAAAGAAT TCTATTTTCT 
ATGGATAGAT ATGATGATTC TATTTCTTGT TGTGATATAA TTTTGAATGA TTATCCTGAA 
AACGGTGATG TCTTGTTTGA TAAATCTTGT AGTTTGGCAA TGCTTTCAAA AGTAGACGAT 
TCATTATTGC TACTTGAAAA ATCAATTTCT CAAGGGAAGC AATACAAAAT TAAAGCACAA 
AAATCAAAAT CTTTTGAAAA ACTATCTGAT AATCCTAAAT TTCAAAAACT AGTATCATAA 

 

Protein sequence

MDDPKTNSIL DEGNRLFLKG KYTEAIAYYD KILDENPKHL SSLNNKGYAL SKLKDYQSAM 
KCYDLALENY PDDLSVLVNK ISSFRKQGNL SEGLSICDKI LESNPKYNIA LYHKERILFS 
MDRYDDSISC CDIILNDYPE NGDVLFDKSC SLAMLSKVDD SLLLLEKSIS QGKQYKIKAQ 
KSKSFEKLSD NPKFQKLVS