Gene Nmar_1554 details

Gene Information

• Locus tag: Nmar_1554
• ID: 5773296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1422385
• End bp: 1422987
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641317206
• Product: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
• Protein accession: YP_001582888
• Protein GI: 161529062
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAAGA TTGCAATATT TGATTATGGA GCTGGAAATA TTTTCAGTCT CAAAAATGCA 
CTAGAAAAAC AAAATGCAAC AGTAGAAGTT CAAACTAAAG TTGACATGCT AAAAGGATAT 
GATGGAATCT TCTTACCCGG AGTTGGAAAT TTTGATCCTG CCATACAAAG TATCAATCGT 
GATTCTGTAG ATTTTCTTGA TATTGTAGGT GATACTCCTG TATTTGGAAT ATGTTTAGGT 
ATGGAGATGT TTTTTGATAA AAGTCAAGAA GGAAAAGAAG AAGGCCTTGG AATAATCAAC 
GGTGATGTTA TCGTTTTACC TGACACCCTA AAGGTTCCAC ACATGGGATG GAATGCACTT 
GAGATAAAAA AAGAAAATAA AATTCTTGAA GGAGTAGAAA ATGGCTCTTG GGTATACTTT 
GTGCATTCGT ATAGGGCAAA TCCTACAACT CAGGATGTGA TAGTTGCAGA ATCTGATTAT 
GACGTTAAAG TTCCTGCTAT AGTTCAAAAG GATAACTATT TTGGAACTCA ATTTCATCCA 
GAAAAATCTG GTGATGTAGG TGCATTAATG CTAAAGAATT TTTTGCGAGA GTGCAAAAAA 
TGA 

 

Protein sequence

MTKIAIFDYG AGNIFSLKNA LEKQNATVEV QTKVDMLKGY DGIFLPGVGN FDPAIQSINR 
DSVDFLDIVG DTPVFGICLG MEMFFDKSQE GKEEGLGIIN GDVIVLPDTL KVPHMGWNAL 
EIKKENKILE GVENGSWVYF VHSYRANPTT QDVIVAESDY DVKVPAIVQK DNYFGTQFHP 
EKSGDVGALM LKNFLRECKK