Gene Nmar_1547 details

Gene Information

• Locus tag: Nmar_1547
• ID: 5774529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1411775
• End bp: 1416979
• Gene Length: 5205 bp
• Protein Length: 1734 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 641317199
• Product: hypothetical protein
• Protein accession: YP_001582881
• Protein GI: 161529055

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 0.114504
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATAACG AAATAGGACG TAAAATAACT AGTCTTACAT TAATGACAAT TATGGTTGCA 
GGTGGACTTA CCTTTGCAAT TCCAGGTGTA ATGCCTGAAG CAATGGCCGC CAACGCCAAC 
CTATTTGTTT CCGCAGAAAA CTCACAGTTT GATAACTACA TGTCAGGACC TCAAGTAATT 
GAGGTCGTCG TAATTGATAG TGACATCAAT GATACAGATG AGGCAAAAGG TGAACCAGAC 
GTAACCGTTA ACGGTAAGGT CCTGAGAATG GTCCAAGCAG TTGATGGTAA CTGGTATGGT 
TACTTTGCAG ACAGAGACCA AGCCCAAATT GCAGACTCTA CTGCTACAAC AGCAGATTCT 
GGATTGGACT TTGGTGTCTT TTGTGCATCA TCATCTGGTA CAGCAGCCTT AGGATTCTCA 
ACAACTGAAA CAGATGGTAT CGCAATTCCA ATTACTATTG CAAATGCAAC AGCAACTGGT 
AACGGTACAC AAACCGGTAG CAGCAGTGGT GGTGCAATTA CTACCACATG TGCAGCAAAT 
ACACTTGATG CATCAACTGC TAATGGTACA ATTAACGTTG TAAGAGAAGC CAAAGATCCT 
GTAGCAGCAT CTGGTAGTGT CAGTGTAGGC CAAATCGGTC TAAAAAATGG TACAGCTAAT 
AGCGGTCCAA ACTGGCCTTT CATTCAGCTC TATGAATTAA ACCCAACAGG TAACGTTGTC 
GTACAGTACA ACAAAGGTGG TGGTGTTCAA TCAACAACAC TTACTTTTGA TACTGTTGAT 
CAATTTGCCG AATTGAGTTT AGATAGAACT GTATTCCCAA GAGTATCACA AGTTCACGCA 
ACAATTACTG ACTTATGGTT AAACATTGAC CCAACTGATG AAGACTCTTG GACATTTGCT 
ACCAACACGA AGAATACTAC ATCATCCTTC AACGTTGATA CATTTTACCA AGTATTCGAT 
GAAAACGGTG CTTCCGGTGG AAGCGCATTA ACCCTGAGAA CAACATTGTC CAGCTTGATG 
TGTGAGGACA ATTGTGTATT AACATTAGAT GTCGATGCAC AAAGCTCTGG CACACCAGTT 
GTGACAATTC AGGATAACGG CGATTCAATC CTTACCCAAC TTAATGCCTC TTCAAATACT 
AATGCAAATA ATGCATCTGC ATTTGGTATT TCAACAGAGA CAGCCAAGTT AGGTACAGGT 
TCCATCCCAG TTACCATCAC CGAACAAGGT CCAAACAGTG GTGTCTTTGG TACTTATGAC 
GAGTCTGACA AGTCAGTACT AAAGATTACA GATAATGCAA AGAGGGGAAC CTCTGCATCA 
CTCGATTACA ATGAAACACC TCAAACTATC CTTGTAGGAT TCTCCTTTGC TAGTATTGAT 
ATTCAGCCAG TGACTGATGA ATGGACCTCT GGACAAGAGA TTCCAGTAGT CATCGTTGAT 
GCTGATCAAA ACAAAAACAG CAGAGCAGAT GAAGACTTAG ACTTAAACAA CCCAGACGTA 
ACCCTGATTC CAGCACTCCG TACTGGTGAT CCATTTACTA TCGATGAGGG TGGAACCCCT 
AGCTTGATCT TTACCAATGG TACAAATGGT GATGATAGCA TCTTTGATAC AGGTGCAATA 
AACAACACCT CAGCAGGTCA AGTAGGTAAC TTTACACTCA ACATCAATGT AACTAGATTT 
TCCAGCGCAA CCAACATCAC TTCAACTGAA TCTATTGATA CATTCAGTAA GAGATTAATC 
TCTGCACAGA CTGCCAATAG TTCAGCAAAC TTTGATGTTG ACTTTGCAAT CATTGATCTC 
GGTAGTGCAA CATTGGAAAC CCTAAAAGAA ACTGTAGTTG ATGAAGATAA CACCGCAGTC 
GGTTTTAACT TCTTTAACTA TGATGTTAGA TCATTAGGTG CAGATACAGT AAGTATCGCA 
TTGCTTAACA CCACAGGAAA TATTCTCCCA TGGGTTAACA ACGATACAAG AAATGTTGAC 
AAAAACAATG CAATATTGTT AGTCAGCAAT TCAACTAATT CACAGGCTTA CGTTGATTTG 
ACCAATGCAG TATCTGATGC AGTTTACGGA TCTACCAATA CTGATAGTAA CGTAAACATC 
GGATTTGCAA TGTACTTCAC AGGTGTCGGC GACCTCGCCG CCAAAGAAGT AATCGTCATG 
GACTTCTTCT CATTTGGTTT CACTGATGAT GGTGTGCAAT CTTCTGAAAG ATTTGCAAAC 
CAAATAATCA GAATTGAAGC TGAAGAAACA GGTGATAACA CAAGTACCTT TGAAGGTTCA 
CTTGAGTATG TCATGGTTAA CCAAATTAAC ATACAGGATG CTGGTACCTT TAGTGGTATC 
ACACCAATCG CAGATGATCC ATCATTCATT GTAATTGAGG ATCTTACTGA CGAAGATGCA 
CCAAGAGTCA ACTATAATGA CTTAGGTGCA GATGGTGTAA CAACTCCTGT ATCTGACCAA 
GAAGAGGCTC CAAGCCACTC TGGTGTTGTA TCTCTAAACG CTGATTCATA CAAGATTGCT 
GACACTGTAG TAATAACTGT AGAAGACTTA GATCTTAACG TAGATTCTGA TCTTATTGAC 
ATCTTTACTG TTGTTTCTGA TAATTCAAAA GCAACAGATG ACGCCGTTGG TTCTGCCACA 
ACTCAATCTT TGAGCTTTGG TGAACTCGGT AGATTATTAG ATGTTACATT TGATGATGTT 
ATCTGGTCAA CTCCTGACGG TGCAAACAAT ACTGCAACTG GTAATGACAG TGACACATGT 
TCCACTGAAC TTAGCAATGC AGGAATTACT GATACCGGAC TTGGAGCAAC TGGATTCACT 
CTAGTTGAAA CCGGCGCAGC AACTGGTGTA TTTGTTGGTG ATTTCCAAAT CCCATCATTT 
TGGTGTAGAG TCTCTGACAC TACAACAACA CCATATACCT ACGCAGGTGA CGAAGAAACA 
ACAACCGGAC TCGATATCGA AGTTAACTAT GTTGACTTCA GAGATGCATC TGGTGAAATC 
GTCGAAGTCG GCGACTCAGC AGGTGTTAGA GCAAACACCG GTTCCGTTAG CCTTGATAGA 
ACTGTCTATC CAGTACCATT TGGTACAATA GCAGATTCTT CAAAAGCCGC TAACGCAGCA 
CCAAATGGAA GATCAGTATT CCCAATTCAC GCAACTGGAA TCACTAGTAC TATTGATTCC 
ACTGAAGAAT TACCTACAGG AGATCTAACT ATCCACGTCA GAATTAACGA TCCAGACTTT 
GATGAAAACC CAGCTGGTGA AGATGCAATG GACCAAGATA ATGCACTCAA AATCTCTGTT 
ATCAGAGGTT CTGATAGTGT AGTTCTCGGC TATGCAGGCG CTTCTGAAAG AACCGGAAAG 
ATTGATGTTG GTGGTAACAA TGGAACCATC TCAAACATCA GAAGCTTCGG TGAAATGGAC 
GAAATCGCAC CAGATGCAGG TATTTTCGAA CTGGATGTAA ACATCAAATT CACTGACGGT 
CCAGCATCAG CACAATGTAA CAGCCATGAC ACCCTCTATA CCGCATTAGA CGGTACTACT 
GGTAAGGCTG ACACTAACAG ATTTGACGAC GGTGCAGCAT CTGGTCAAGA ATACTGTATC 
TTACAAGGAG ATATTCTCCA AGTAGAATAC ACTGATCCAG CTGACGCATC TGGTGATGCA 
AATACTGTTA CTGATTCTGC AACATTTGAC CTAAGAAACG GTGTATTACA ATCTGACAAA 
TCCGTATACA TTATCGGTTC AGACATGATC TTAACACTCA TTGAGCCAGA CTTTGATCTT 
GACAATGACA GTGCTGAGAC CTATGACTTG GACTTGATCG AATGGGACTC TGATGCCGCC 
ACCACTACCA TGGGTAACAA AGGTGTAACC GGCGCAGCAG CTGCATTTGA CCCAGAACCA 
ACTGACTTTA GAGAAACAGG TGACTCTACT GGTATCTTCC AGATCGTCAT CGAAATTCCA 
GAATCACTTT CTAATGACAA ATTAGAAAGA GGTGAGGAAA TCATCCTAGA GTATACTGAC 
TGGGGTCCAT CCGGATCTGA TTATGTAGGA GATGAAGATG AAGATGTCAA CTTGACAATC 
TACACTTCAA ACTTCGGAGC AACTGTAGAA CTTGACCAAA AAGTATACTC TTGGACTGAC 
AAAGTATACA TCACTATTGT CGCACCAGAT CACAACTTTG ACAGTGACCT AGTTGACGAA 
ATCGGAGAAA CTGACAGTGA CCCAATTAAG GTCTCTACCA GAGGATTTGA TCTTGACAAC 
TACAAACTCG TCGAGACTGG TACTGACACA GGTATCTTTA CTGGTGAAGT AATCCTCACA 
GGATTTACTG CCCATGATGC TGATGGTGAT GGAAATACTG GCGATGCAAC CGGTACCACT 
TCTGGTAGCG GTCCAACAGA TGGTCTCTTG GCCACTGACG ATGATGACGG ACTTACTGTC 
TCCTTCGAAT TCTCTGAAGA TGAGACAATT GTAGGTTCTG CCCTCATTAG ATGGAACATC 
GGTGAAGTCC AATGGCTTGA GGCAAGCTAT CCAGCTAGCG GAACAGGTGT TGTAAGAGTA 
ATTGATCCAG ACATGAACTT AGATCCAGAA GCAGTCGACA ACTTCGAAGT CGACGTATGG 
TCTGACTCCG ATGCCGGAGG TATTGATCTT ACTGTAACTG AGACTAATGA GGCAACCGGA 
ATCTTTGAGG GAACTGTGTT CTTCACAACC CTTGATGAAT CATCTGGTCA CAGACTCAGA 
GTTTCAGAAG GTGACACAGT CACTGCAGAA TATGAGGACA ATACACTACC TGATCCATAC 
ACAACTGCAG ATGAACTTGA TATTACTGCC ACTTCACTAA TTGGCACTGT AGTACCACCT 
CTCGAGAGAG CACCAGCTGC TAACTTGAGA ACCGTTGACG CATTCGGTAA CAGCTTAGAT 
TCTGTTTCCG TTGACCAACA GGTACAAATC AGCGCTGACT TAGCAAATGG TCAGGATAGA 
GAGCAATCAT TTGCATACTT GGTACAGATT CAGGATGCAA ACGGTGTTAC AGTCTCACTA 
GCATGGATTA CAGGTTCACT ATCTAGCGGT CAATCATTCA GCCCAGCTTT ATCATGGATT 
CCAACTGAAG CAGGAACATA CACTGCTACT GCATTCGTTT GGGAGTCTGT TGATAATCCT 
ACGGCATTAT CACCACCAGT TAGTACAACT GTCAACGTAA GTTAG 

 

Protein sequence

MNNEIGRKIT SLTLMTIMVA GGLTFAIPGV MPEAMAANAN LFVSAENSQF DNYMSGPQVI 
EVVVIDSDIN DTDEAKGEPD VTVNGKVLRM VQAVDGNWYG YFADRDQAQI ADSTATTADS 
GLDFGVFCAS SSGTAALGFS TTETDGIAIP ITIANATATG NGTQTGSSSG GAITTTCAAN 
TLDASTANGT INVVREAKDP VAASGSVSVG QIGLKNGTAN SGPNWPFIQL YELNPTGNVV 
VQYNKGGGVQ STTLTFDTVD QFAELSLDRT VFPRVSQVHA TITDLWLNID PTDEDSWTFA 
TNTKNTTSSF NVDTFYQVFD ENGASGGSAL TLRTTLSSLM CEDNCVLTLD VDAQSSGTPV 
VTIQDNGDSI LTQLNASSNT NANNASAFGI STETAKLGTG SIPVTITEQG PNSGVFGTYD 
ESDKSVLKIT DNAKRGTSAS LDYNETPQTI LVGFSFASID IQPVTDEWTS GQEIPVVIVD 
ADQNKNSRAD EDLDLNNPDV TLIPALRTGD PFTIDEGGTP SLIFTNGTNG DDSIFDTGAI 
NNTSAGQVGN FTLNINVTRF SSATNITSTE SIDTFSKRLI SAQTANSSAN FDVDFAIIDL 
GSATLETLKE TVVDEDNTAV GFNFFNYDVR SLGADTVSIA LLNTTGNILP WVNNDTRNVD 
KNNAILLVSN STNSQAYVDL TNAVSDAVYG STNTDSNVNI GFAMYFTGVG DLAAKEVIVM 
DFFSFGFTDD GVQSSERFAN QIIRIEAEET GDNTSTFEGS LEYVMVNQIN IQDAGTFSGI 
TPIADDPSFI VIEDLTDEDA PRVNYNDLGA DGVTTPVSDQ EEAPSHSGVV SLNADSYKIA 
DTVVITVEDL DLNVDSDLID IFTVVSDNSK ATDDAVGSAT TQSLSFGELG RLLDVTFDDV 
IWSTPDGANN TATGNDSDTC STELSNAGIT DTGLGATGFT LVETGAATGV FVGDFQIPSF 
WCRVSDTTTT PYTYAGDEET TTGLDIEVNY VDFRDASGEI VEVGDSAGVR ANTGSVSLDR 
TVYPVPFGTI ADSSKAANAA PNGRSVFPIH ATGITSTIDS TEELPTGDLT IHVRINDPDF 
DENPAGEDAM DQDNALKISV IRGSDSVVLG YAGASERTGK IDVGGNNGTI SNIRSFGEMD 
EIAPDAGIFE LDVNIKFTDG PASAQCNSHD TLYTALDGTT GKADTNRFDD GAASGQEYCI 
LQGDILQVEY TDPADASGDA NTVTDSATFD LRNGVLQSDK SVYIIGSDMI LTLIEPDFDL 
DNDSAETYDL DLIEWDSDAA TTTMGNKGVT GAAAAFDPEP TDFRETGDST GIFQIVIEIP 
ESLSNDKLER GEEIILEYTD WGPSGSDYVG DEDEDVNLTI YTSNFGATVE LDQKVYSWTD 
KVYITIVAPD HNFDSDLVDE IGETDSDPIK VSTRGFDLDN YKLVETGTDT GIFTGEVILT 
GFTAHDADGD GNTGDATGTT SGSGPTDGLL ATDDDDGLTV SFEFSEDETI VGSALIRWNI 
GEVQWLEASY PASGTGVVRV IDPDMNLDPE AVDNFEVDVW SDSDAGGIDL TVTETNEATG 
IFEGTVFFTT LDESSGHRLR VSEGDTVTAE YEDNTLPDPY TTADELDITA TSLIGTVVPP 
LERAPAANLR TVDAFGNSLD SVSVDQQVQI SADLANGQDR EQSFAYLVQI QDANGVTVSL 
AWITGSLSSG QSFSPALSWI PTEAGTYTAT AFVWESVDNP TALSPPVSTT VNVS