| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1540 |
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| Symbol | |
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| ID | 5773201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1402714 |
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| End bp | 1403577 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 641317191 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001582874 |
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| Protein GI | 161529048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | [TIGR00588] 8-oxoguanine DNA-glycosylase (ogg) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000245501 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAGAT TCCAATCTAA AATGCAAATA AAGCAACCAA TAGATGTTGA AAATTCAATA
AACAGCGGTC AAGTTTTTCT TTGGAGAAAG AATAAAGAAT TTTGGTACGG AGTAAACGGA
CAAGACATAC TAGAAGTAAA CAAAAATGGA AAAATAAAGT CATTACAAAA TTACAAAACA
GATTTTTTTA GAAATAATGA TAATTTTGAT GAAATTATCA AATCGATTTC AAAAGACAAG
ATAGTAAAAA ATGCTGTAAA AAAATATCCA GGGCTTAGAA TCATAAAACA AGATCCATTC
CAATGTTTGA TTTCATTTAT CGTATCATCA AACTCTAACA TCCAAAAAAT TAAAACAAAT
CTAGAAAACA TATCACAAAA ATTTGGAGAA AGAGTGGAAT ACAAAGATCA AGAGTTTTTT
TTATTTCCTA ATGCAAAAAC GCTTTCCAAA GCATCAATAA CTGAAATTAA AAATTGTGGA
GTTGGATATC GTGCAAAATT CATCAAAGAA GCCTCAAAAA TTTTTGCTTC TGAAAAAATT
ATGATTGATG ATTTGAAATC AAGTGATTAT TTTGATGCAA AAAAGAAGAT TCGCATCATT
CCAGGCATAG GAAACAAAGT TGCAGATTGT ATTTTATTAT TTTCTCTTGA TAAGTTAGAA
TCATTTCCAT TAGATAGATG GATGATTAGA ATTTTAGAGA AATATTATTC AAAAAAATTT
CAAATAGATA CCAAAACAAT TACAGAAAAA CAATATGATA TTCTACATGA AAAGATTGTA
GATTATTTTG GGCTATATGC AGGATATGCA CAACAGTTTC TCTTCAAAAT GGAAAGAGAA
AATTATCAAA AAAAGTGGCT GTAA
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| Protein sequence | MKRFQSKMQI KQPIDVENSI NSGQVFLWRK NKEFWYGVNG QDILEVNKNG KIKSLQNYKT
DFFRNNDNFD EIIKSISKDK IVKNAVKKYP GLRIIKQDPF QCLISFIVSS NSNIQKIKTN
LENISQKFGE RVEYKDQEFF LFPNAKTLSK ASITEIKNCG VGYRAKFIKE ASKIFASEKI
MIDDLKSSDY FDAKKKIRII PGIGNKVADC ILLFSLDKLE SFPLDRWMIR ILEKYYSKKF
QIDTKTITEK QYDILHEKIV DYFGLYAGYA QQFLFKMERE NYQKKWL
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