Gene Nmar_1530 details

Gene Information

• Locus tag: Nmar_1530
• ID: 5773255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1394794
• End bp: 1395360
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 641317181
• Product: RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
• Protein accession: YP_001582864
• Protein GI: 161529038
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.000000178191
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCACAAGT CGTTTGATCT ATACTTTGTA TCCTCAAACT CTCACAAATA CAAAGAGGCA 
AAAAATATTC TAGATTCCTT TGGAATAAAA TTAGGTTTTC TCAAATTAAC TTTGGAAGAA 
ATCCAATCCA ATTCTCTAAA AGAGATTGCA GAAAACAAAG CTAAAGATGC ATTTTCTAAA 
TGTAAAAAAC CAATAATTAT TGAAGATGAT GGTTTATTCA TTGATTCTTT GAATGGGTTT 
CCAGGTCCTT ATTCATCATA TGTGTTCAGA ACAATTGGCA ACAATGGAAT TCTAAAGCTA 
CTTTCATCAA AAAGAAATGC AAAGTTTGTT TCTCTTATTA CTTATTGTGA TAAAAAAAAT 
CTCAAAACTT TTGACGCAAA ATTAGATGGT ACTATTTCAA AATCTCAAAA GGGTAAGGGT 
TGGGGATATG ATCCAATATT CATTCCAAAA AATTCTAGAA AAACTTTTGC AGAAATTAAT 
CACAAAAATG AATTATCACA CAGATTCAAA GCATTAAAAA AATTCTCTAA TTGGTATTTA 
CATAAGCTGG AATCCAACGA TCGATAA 

 

Protein sequence

MHKSFDLYFV SSNSHKYKEA KNILDSFGIK LGFLKLTLEE IQSNSLKEIA ENKAKDAFSK 
CKKPIIIEDD GLFIDSLNGF PGPYSSYVFR TIGNNGILKL LSSKRNAKFV SLITYCDKKN 
LKTFDAKLDG TISKSQKGKG WGYDPIFIPK NSRKTFAEIN HKNELSHRFK ALKKFSNWYL 
HKLESNDR