| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1527 |
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| Symbol | |
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| ID | 5773680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1389055 |
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| End bp | 1391223 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641317178 |
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| Product | thrombospondin type 3 repeat-containing protein |
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| Protein accession | YP_001582861 |
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| Protein GI | 161529035 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000497915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAACAAT ATCTTTTAGG ATTTTTAATT TTACTTACCA TAACTATTGG AATGACACCA
AACAGTGTTT TTGCAAATAC TACAATTGAC ACTGATGGTG ATGGTGTTCC AAATGCTGTT
GATCAATGTC CTCATCTCTT AGAGGACTAT GATCCTGAAT ACGGTAACAA CATTGACGGT
TGTCCTGCAG ACTTTGTTCC ATGGTATGAT GCTGATTATG ATGGTATTCA AGATCATGTT
GATAACTGTC CAACCGTAAA AGAAACCTAC AATCGTTTCC AAGACACTGA CGGTTGTCCT
GATTTGTCCC CTGATGGTCC AAAAAATGTT GCTGATACCG ATGGCGATGG CTTTCCTGAT
TATCTAGACT TGTGTCCAAA TAGACCTGAA ACATTTAATG GAATTGATGA CACTGACGGT
TGTCCTGATG ATGATCGTTC TATAATGGAT CGTGATCAAG ATGGAATTTC TGACGGTAAA
GATACTTGTC CACTAGAACC TGAGACTTAC AACAAATACC AAGACACTGA TGGTTGTCCT
GATTCAGTTG ATGGTGCACT ATCTGGATAT ACATTCCCTG ACACTGACGG TGATGGAATT
GAAGATAGAT GGGATGCTTG TATTCATGAG CCAGAAAATT ATAATAATAA TCTAGATTGG
GACGGTTGTC CTGATATTCC TGGAGTGACG AATCCTACAG CTCCTGATGC TGACTTTGAT
GGCATTCCTG ATGATGTTGA TGCTTGTCCA TTAGATCGTG AAAATTATAA TAAATTTGAA
GACACTGACG GTTGCCCAGA TGTTGTCAAA CATGTAATCT TTGGTGATTC TGATGGAGAT
GGAATACTTG ATCAAAATGA TTCGTGTCCA TTTAGTCCTG AGACTTATAA CAAATACTTA
GACACTGACG GTTGCCCTGA TTGGGTTGCT GATAACAAAC TATCTGCTGA CACTGATGGT
GATGGAATTA TTGATAATCT AGACTTGTGT CCTACTAGAC CTGAAACTTA CAATAAATTC
CAAGATACTG ATGGTTGTCC TGATGATTCA CTTTATAGAT TTGATGCAGA CATGGATGGA
ATTTTAGACA TTAATGATGC ATGCCCACTA GAACCTGAGA CTTACAATAA ATACCAAGAC
ACTGATGGTT GTCCTGATTC AGTTGATGGT GCACTATCTG GATATACATT CCCTGACACT
GACGGTGATG GAATTGAAGA TAGATGGGAT GCTTGTATTC ATGAGCCAGA AAACTATAAT
GGATTTTTAG ATGACGACGG TTGCCCTGAA ATTGTAGGTA CTTCTGGAAC TGATATGATT
GATTCTGATT ATGATGGTAT TGCAGACCAC TTGGATGAAT GTCCAACTAT TGCTGAAAGA
TATAATAAAT TCCAAGATGA AGATGGATGC CCTGACAGTG TTGTTCATCA AACAGTAGGT
GACTATGATG GAGATGGAAT ATTTGATGAT GTGGATCAAT GTCCTACTGC AAAAGAAACT
TACAATAAAT TCCAAGACAC TGACGGTTGC CCTGATTGGG TTGCTGATAA CAAACTATCT
GCTGACACTG ATGGTGATGG AATATTTGAT TATCTAGACT TGTGTCCTAC TAGACCTGAA
ACTTACAATG GATTCCAAGA CACTGATGGT TGTCCAGATG ATTCTATTTC TAAACTTGAT
TCAGATATGG ATGGAATTTT AGACATTAAT GATGCATGCC CACTAGAACC TGAGACTTAC
AATAAATACC AAGACACTGA TGGTTGTCCT GATTCAGTTG ATGGTGCACT ATCTGGATAT
ACATTCCCTG ACACTGACGG TGATGGAATT GAAGATAGAT GGGATGCTTG TATTTATGAG
CCAGAAAACT ATAATGATTA TCTAGATTGG GACGGTTGTC CTGATGTCCT AGGTGCAGAA
TCCACTGCCC CTGTATATGC TGACTCTGAT GGTGACGGCT ATCCTGATTC AATTGATTCT
TGTCCATCAA AACCCGAAAC CTGGAACAAA TATCTCGATA AAGATGGCTG TCCTGATATT
GCTCCAGAAC AACAGAGATT TGTCCATGAT GATGATCTAG ATGACATCAT TAATGATGAA
GACTTGTGTC CACTTGATCC TGAAGACTAT GATGGTGACA GAGACACTGA CGGTTGTCCT
GATCCATAA
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| Protein sequence | MKQYLLGFLI LLTITIGMTP NSVFANTTID TDGDGVPNAV DQCPHLLEDY DPEYGNNIDG
CPADFVPWYD ADYDGIQDHV DNCPTVKETY NRFQDTDGCP DLSPDGPKNV ADTDGDGFPD
YLDLCPNRPE TFNGIDDTDG CPDDDRSIMD RDQDGISDGK DTCPLEPETY NKYQDTDGCP
DSVDGALSGY TFPDTDGDGI EDRWDACIHE PENYNNNLDW DGCPDIPGVT NPTAPDADFD
GIPDDVDACP LDRENYNKFE DTDGCPDVVK HVIFGDSDGD GILDQNDSCP FSPETYNKYL
DTDGCPDWVA DNKLSADTDG DGIIDNLDLC PTRPETYNKF QDTDGCPDDS LYRFDADMDG
ILDINDACPL EPETYNKYQD TDGCPDSVDG ALSGYTFPDT DGDGIEDRWD ACIHEPENYN
GFLDDDGCPE IVGTSGTDMI DSDYDGIADH LDECPTIAER YNKFQDEDGC PDSVVHQTVG
DYDGDGIFDD VDQCPTAKET YNKFQDTDGC PDWVADNKLS ADTDGDGIFD YLDLCPTRPE
TYNGFQDTDG CPDDSISKLD SDMDGILDIN DACPLEPETY NKYQDTDGCP DSVDGALSGY
TFPDTDGDGI EDRWDACIYE PENYNDYLDW DGCPDVLGAE STAPVYADSD GDGYPDSIDS
CPSKPETWNK YLDKDGCPDI APEQQRFVHD DDLDDIINDE DLCPLDPEDY DGDRDTDGCP
DP
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