Gene Nmar_1522 details

Gene Information

• Locus tag: Nmar_1522
• ID: 5773022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1383857
• End bp: 1384567
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641317173
• Product: hypothetical protein
• Protein accession: YP_001582856
• Protein GI: 161529030

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.000116972
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGGATTCCT TACTTGATGA TGTAAAGGCA CTTTTGGAAA AAGATTTTGG TGATGATAGA 
ATCCTAAAAC AAATTCGTCG AGCTTGTGAA AATAATGAGG TTATTAGTAA TTTTGAAAGA 
AACTATGTAA AAAAATTAGC AGAAAAACAT CTTGGAAGAA AACCAGAAAC TCCTAATGTT 
GAAAAAACTG AAATTCCTGT TGAAAAACCC GTGGTTCCAG ATGTAGTGAT ACCTGAAACA 
CCATCAATTC AAAAAACTCA AACAATCCAT AAAACACAAC CAAAAATTTC CTCTTCTTCC 
TCAAAGAACA AGTTAATGAT AGGAATTGGT GTTGTTGCAT TGGTAGTAAT TATTGCAGCT 
GCTGTATCTC TTGGTGGAAT TTCTAATGTG ACTCCTAAGA CGGTTCCTCC TATTGTAAAT 
ACTCCTACAG GAACAGAATC ACTAATGATT CAAACTGACT TTTCATCATA CAACAATAAA 
GACATCATAT CAATAAATGG TATTTCAGAT ACCACTGGTT CAGTAAATCT ATCCATAGAA 
AACCAGAAAG GTGAACTTGT TTGGACAGAA CAACTCTCTC TAAAAAGTGA TGGAAGATAT 
TCCACACTTG CAATTGCTGG TGGCCCTGGA TGGGAGAGTT CTGGCACTTA CACTATCAAA 
GTAGATAATG GTGCTGAGAC AAAGTCTAGC ACATTTTCAT TTACTACATA A 

 

Protein sequence

MDSLLDDVKA LLEKDFGDDR ILKQIRRACE NNEVISNFER NYVKKLAEKH LGRKPETPNV 
EKTEIPVEKP VVPDVVIPET PSIQKTQTIH KTQPKISSSS SKNKLMIGIG VVALVVIIAA 
AVSLGGISNV TPKTVPPIVN TPTGTESLMI QTDFSSYNNK DIISINGISD TTGSVNLSIE 
NQKGELVWTE QLSLKSDGRY STLAIAGGPG WESSGTYTIK VDNGAETKSS TFSFTT