| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1519 |
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| Symbol | |
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| ID | 5774621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1382425 |
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| End bp | 1382988 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641317170 |
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| Product | TATA-box binding family protein |
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| Protein accession | YP_001582853 |
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| Protein GI | 161529027 |
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| COG category | [K] Transcription |
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| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00147991 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCTCAAA CAAAGCCTAT TGTGAGTGTT GAAAATGTTG TTGCATCTGC ATCAGTTGAT
CAAAAAATTG ACTTGAATGA GATTACAGAA AAATTTCCAG ATACTGAATA TCATCCAGAA
CAATTTCCAG GATTAGTTTT CAGATTAAGT ACTCCAAGAA CTGCAACATT GATCTTCAGA
ACAGGAAAAA TGGTTTGTAC TGGTGCAAAA TCTGAAGAAA TGGCAATCAA AGCTGTAAAC
ACTGTAGTTC AAAAATTAAG AAAAGGAAAA ATCAAAATAA AAAATGATGC AGTTATTACT
GTACAAAATA TTGTTGCAGC AATTAATCTA GGTGGAAAAA TACATCTAGA AAAAGCAGCA
AGGACATTAC CAAGAAGCAT GTACGAACCT GAGCAATTTC CAGGACTAAT TCACAGAATG
CTTGATCCAA AAACCGTAAT CTTGTTATTT GCATCAGGAA AATTAGTATG TACTGGAGCT
AAAAAAGAAT CAGATGTTTA TCGCTCTGTT CACAACCTAC ATTCAGTCTT AGAAGAAAAA
AATCTAATGA TCTATGACGA ATAG
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| Protein sequence | MPQTKPIVSV ENVVASASVD QKIDLNEITE KFPDTEYHPE QFPGLVFRLS TPRTATLIFR
TGKMVCTGAK SEEMAIKAVN TVVQKLRKGK IKIKNDAVIT VQNIVAAINL GGKIHLEKAA
RTLPRSMYEP EQFPGLIHRM LDPKTVILLF ASGKLVCTGA KKESDVYRSV HNLHSVLEEK
NLMIYDE
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