Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1518 |
Symbol | |
ID | 5774027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1381905 |
End bp | 1382360 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641317169 |
Product | hypothetical protein |
Protein accession | YP_001582852 |
Protein GI | 161529026 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00559169 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAATGCC TTTCAGTATC TCAACCATTT GCTGAATTAA TCATTTTAGG AAAAAAAACA ATAGAGTTAC GCAAATGGAA TACAAACTAT CGTGGAGAAT TACTGATTCA TTCACCACTA AAAATTAGAA AAGAAGATGC AAAGCGATTA AAGATTGACA AAAAATTTGT CACAGGTGCA ATTGTTGGGA AAGTGGAAAT CTATGATGTA AAAAAATACG ATTCACAAAA ACAAGTAAAG TCAGATCAAA AATTTCATTT TGCATCAAAA AATTTCCATG ATAGAACCTA CGGATTTTTG CTAAAGAACG CAAAAACATT TCGAGTTCCA ATTCCATACA AAGGGCAATT AGGATTGTTT GAAGTCAAAC TTCCTAAAAC AAAAATCAAA AACAAAGAGA TAGTGTCTGA CATTATTGAT GAAGAATATC GATACCAATG GATCGGACAC CATTAA
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Protein sequence | MKCLSVSQPF AELIILGKKT IELRKWNTNY RGELLIHSPL KIRKEDAKRL KIDKKFVTGA IVGKVEIYDV KKYDSQKQVK SDQKFHFASK NFHDRTYGFL LKNAKTFRVP IPYKGQLGLF EVKLPKTKIK NKEIVSDIID EEYRYQWIGH H
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