Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1509 |
Symbol | |
ID | 5774177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1372252 |
End bp | 1373673 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641317160 |
Product | phosphoesterase DHHA1 |
Protein accession | YP_001582843 |
Protein GI | 161529017 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0271209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAAAT CACTTGATGA GTCACTTTCG TTTTTCAAAG ATAAAGTTAC AGATTGCATA AGATCTAAAA AATCAATTTT TGTTACAACC CACATTGATT GTGACGGGTT GACATCTGGA AGTATCATTA CCAAAGCTCT GATAAGAGCT GGGGCAAATT GTACTGTTAG GACATCAAAA GAATTTAGCA AAAATGTTGT AGACTCTTTC AAAACAGATT CTAGAGATTT TCACATAGTT ACTGATCTTG GAGGAGGTTT TGGAAAGGAC CTCAATGAGA CACTTGGAGA TAACTGGATT GTCTTGGATC ATCACCAAAT CCCAGATGAG GAGATAGAGA ATCCAAATGT GATTAATGCA TGGAAGTATG GAATCGATGG AGGCCTTGAA ATTTGTGCCG GCGGAATGGC ATATCTAGCA TCCATGGCAC TTGATGAGAA AAACTCTGAC TTGTCATCAA TTGCAGTAGT ATCTGCTCTT GGAGACAGAC AGGACCAAGG AGAAAGAAAG TCATTTACTG GAAAGAATTT TGAAATCGCA AACACTGCAA AAGAACAAGG ACTAGTTGAG ATTGACTTGG ACCTATTATT GGTTGGAAGA GAGACAAGAC CACTTCCAGA TGCCTTGGCA TTTACATCCC AGCCATTTAT TGAGGGACTT ACCTGGAACA GAGATGCCTG CCTTTCACTA CTAAATTCAT CAGGAATCCA GCTTAAAGAC GAGGGCAGAT GGAGGGTTCC AGCAGAGCTA GACGAGGAAG AAAAAAGACA GGTAATCGAG TCAATCACCA AATTTACAGC TGGCAAAAAT GCCACAGAGA TAATGTCTGA ATTAATCGGA TACACTTACA CATTTCCTAG AGAAGACAAG AGGAGTTTCT TGAGGGATGG TAGAGAGTTT TCAACTATGC TAAACTCTTG TGGAAGAATA AACCGCTCCG GAGTCGGAAT GGCAATCTGC ATGGGAGACA GAAACAAGAT TCTAAGAGAA GGGGAGACAA TCCTGACAGA CTATAGAAAG ATGATCAGAG AATACATGAA CATTCTATCA AATGAGAGAT GGAGGATTTC TGAAAGTGAG ACATGTGTTA TGGTAAATGG AGAAGACATT GTCCCTGAAA CAATGACTGG AACCATCTCA TCACTAATTG CAGGCTCTCC AAAGAATTCT GGTAAAATTG TAATTCTCAG AACAAAGGGA GAAGAGAACA CTATCAAGTT TTCATCAAGA AAGTCATTTG GTTGCAAATC AGACATCAAC CTAAGTGATC TGATGAGAGC TGGTGCTGAG AAGTTTGATG GTATTGGAGG AGGTCATGAT GCAGCAGCTG GAGCAAAAAT AACTAAAGAC AAATTAGATG AGTTTCTCAA TTATTTAGAA GTAAATGTCG TTAACGTGTC AAGTGCAGAT AGTCCTCAGT AA
|
Protein sequence | MTKSLDESLS FFKDKVTDCI RSKKSIFVTT HIDCDGLTSG SIITKALIRA GANCTVRTSK EFSKNVVDSF KTDSRDFHIV TDLGGGFGKD LNETLGDNWI VLDHHQIPDE EIENPNVINA WKYGIDGGLE ICAGGMAYLA SMALDEKNSD LSSIAVVSAL GDRQDQGERK SFTGKNFEIA NTAKEQGLVE IDLDLLLVGR ETRPLPDALA FTSQPFIEGL TWNRDACLSL LNSSGIQLKD EGRWRVPAEL DEEEKRQVIE SITKFTAGKN ATEIMSELIG YTYTFPREDK RSFLRDGREF STMLNSCGRI NRSGVGMAIC MGDRNKILRE GETILTDYRK MIREYMNILS NERWRISESE TCVMVNGEDI VPETMTGTIS SLIAGSPKNS GKIVILRTKG EENTIKFSSR KSFGCKSDIN LSDLMRAGAE KFDGIGGGHD AAAGAKITKD KLDEFLNYLE VNVVNVSSAD SPQ
|
| |