Gene Nmar_1494 details

Gene Information

• Locus tag: Nmar_1494
• ID: 5773530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: -
• Start bp: 1361774
• End bp: 1362250
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 641317142
• Product: cytidyltransferase-like protein
• Protein accession: YP_001582828
• Protein GI: 161529002
• COG category: [R] General function prediction only
• COG ID: [COG1019] Predicted nucleotidyltransferase
• TIGRFAM ID: [TIGR00125] cytidyltransferase-related domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 0.249918
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCAAT TCTCTCTAGT TGCAATGGGT GGGACATTTG ATATTATTCA CAGAGGACAC 
ATTACATTGC TCTCAAGTGC ATTTGAGATT TCAGATAAAG TAATCATTGG ATTGACTAGT 
GACGAGTTTG CAAAAAAACG CGGAAAGACA CTTTCAAACA ACTATGAGAA ACGCCTTGCA 
AATCTAACTG AGACAATCTT TAAGGAATTT CCAAAATCTT CATTTCAAAT CAGTAAACTC 
GATAATGACT TTGGTCCTGC TGTCCTAGAA CCAGAAGTAC AAGCACTAGT TGTAAGTGAT 
GAGACAAGCA GTCAGGGAGA TGTGCTAAAT GACTTGAGGG CAAAAAAGAA TCTCTCCCCA 
GTAGAAGTCA TAACAGTTCC AATGCATTTG GCAAAAGACG GTTCTCGAAT ATCTACTACT 
AGAATCAAAA ACTCTGAAAT TGATTCAGAG GGAAACTTGT TATCAGTTGA CAAGTAG 

 

Protein sequence

MSQFSLVAMG GTFDIIHRGH ITLLSSAFEI SDKVIIGLTS DEFAKKRGKT LSNNYEKRLA 
NLTETIFKEF PKSSFQISKL DNDFGPAVLE PEVQALVVSD ETSSQGDVLN DLRAKKNLSP 
VEVITVPMHL AKDGSRISTT RIKNSEIDSE GNLLSVDK