Gene Nmar_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1467 
Symbol 
ID5774679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1334547 
End bp1335326 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content35% 
IMG OID641317115 
ProductExcalibur domain-containing protein 
Protein accessionYP_001582801 
Protein GI161528975 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA AGTTACTTCG CAATTTAGGA ATAGCAGCTG TAGTTGTAAT TGTCACAATA 
TTTGCAGTTG GGTCAATAGA ACAGCAAGAA CAAAAACTTG ATTCTGTAGA AAATAAAATA
GAAGTAGAAA GTGTTCCTGT AGAAAATGAA ATTGAAGTAA AAAATGAACC TGTAGAAAAT
AAAATAGTAG AAAGTGTTCC TGTAGAAAAG CAAATAGTAG TAAAATCCAC AGAATGTTCA
GGAGATGCTT TGTGTTTTTC TGGTAAAATT ACGCAGATAA TTGATGGAGA CACTGTTAAA
GTCGATGGAA AGTCTATACG ATTTGCACTA GTTGATGCTC CTGAATTAAA ATACGATGGC
GGACAAGCAA AACAATTTCT CGAACAAGTT TGTCCAGTTG GATCTCAAGT TATAGTTGAT
CAGGATGACG ATCAACTTTC AGACAAGTAT GGCAGAATGT TAGGAGTGAT TTACTGTAAT
GGTATGAATC TAAATCAAGA AATACTTGAT TCAGGTATTG GAGATCTTTA TGAAGCATTT
TGTGATCAAA GTGAATTTGC TACTCATTAT TGGGCAACAA AACATGGATG TGGTGATTCA
GAAGATGAAA TAACAACTCA ACAAATTCAA GACTGTGATT CATCTTATCC TGACTTTTGC
ATTCCATCTT CACCACCTGA TTTAGATTGT GGCGATATCT CTCAGAAAGA TTTCACAGTA
TTGCAACCGG ATCCACATAG ATTTGATGGG GATAAGGATG GCATTGGATG TGAATCCTGA
 
Protein sequence
MNTKLLRNLG IAAVVVIVTI FAVGSIEQQE QKLDSVENKI EVESVPVENE IEVKNEPVEN 
KIVESVPVEK QIVVKSTECS GDALCFSGKI TQIIDGDTVK VDGKSIRFAL VDAPELKYDG
GQAKQFLEQV CPVGSQVIVD QDDDQLSDKY GRMLGVIYCN GMNLNQEILD SGIGDLYEAF
CDQSEFATHY WATKHGCGDS EDEITTQQIQ DCDSSYPDFC IPSSPPDLDC GDISQKDFTV
LQPDPHRFDG DKDGIGCES