Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1467 |
Symbol | |
ID | 5774679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1334547 |
End bp | 1335326 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641317115 |
Product | Excalibur domain-containing protein |
Protein accession | YP_001582801 |
Protein GI | 161528975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAA AGTTACTTCG CAATTTAGGA ATAGCAGCTG TAGTTGTAAT TGTCACAATA TTTGCAGTTG GGTCAATAGA ACAGCAAGAA CAAAAACTTG ATTCTGTAGA AAATAAAATA GAAGTAGAAA GTGTTCCTGT AGAAAATGAA ATTGAAGTAA AAAATGAACC TGTAGAAAAT AAAATAGTAG AAAGTGTTCC TGTAGAAAAG CAAATAGTAG TAAAATCCAC AGAATGTTCA GGAGATGCTT TGTGTTTTTC TGGTAAAATT ACGCAGATAA TTGATGGAGA CACTGTTAAA GTCGATGGAA AGTCTATACG ATTTGCACTA GTTGATGCTC CTGAATTAAA ATACGATGGC GGACAAGCAA AACAATTTCT CGAACAAGTT TGTCCAGTTG GATCTCAAGT TATAGTTGAT CAGGATGACG ATCAACTTTC AGACAAGTAT GGCAGAATGT TAGGAGTGAT TTACTGTAAT GGTATGAATC TAAATCAAGA AATACTTGAT TCAGGTATTG GAGATCTTTA TGAAGCATTT TGTGATCAAA GTGAATTTGC TACTCATTAT TGGGCAACAA AACATGGATG TGGTGATTCA GAAGATGAAA TAACAACTCA ACAAATTCAA GACTGTGATT CATCTTATCC TGACTTTTGC ATTCCATCTT CACCACCTGA TTTAGATTGT GGCGATATCT CTCAGAAAGA TTTCACAGTA TTGCAACCGG ATCCACATAG ATTTGATGGG GATAAGGATG GCATTGGATG TGAATCCTGA
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Protein sequence | MNTKLLRNLG IAAVVVIVTI FAVGSIEQQE QKLDSVENKI EVESVPVENE IEVKNEPVEN KIVESVPVEK QIVVKSTECS GDALCFSGKI TQIIDGDTVK VDGKSIRFAL VDAPELKYDG GQAKQFLEQV CPVGSQVIVD QDDDQLSDKY GRMLGVIYCN GMNLNQEILD SGIGDLYEAF CDQSEFATHY WATKHGCGDS EDEITTQQIQ DCDSSYPDFC IPSSPPDLDC GDISQKDFTV LQPDPHRFDG DKDGIGCES
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