Gene Nmar_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1443 
Symbol 
ID5773430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1313572 
End bp1314030 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content41% 
IMG OID641317090 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001582777 
Protein GI161528951 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAAAA AAATTGCTGC AGCAAGCATA GTTGGTATAG TAATCATTGT GTCCCTTGCT 
GTTGCTTTTT CAACTGAGAT GGAACCACAG CCAGAACCGC AACCTGAATC AAACGCTGTC
TCCTCTCATT CCATGCAAGG AGTCATACAA CCTGATGTTA TGACTGGAGG CGATGTTATC
ATGCCAACCA AAGTCTCACG ACCTGGATGT GAAGAAACTG ACAGATGCTA CATTCCATCT
GTAATTACAA TTAGTGCAGG AGAATCTGTA ACGTGGGTAA ATGAGGATTC AGCATTTCAC
AGTGTAACTT CTGGATTCTA TGATGCACCA CAAGATCTTT TTGATAGCGG ACACATGGAT
CCATTTGATT CCTATACGCT AACCTTTGAT GAGCCAGGAA CTATTGATTA CTATTGCACC
TTGCATCCTT GGATGGAAGG ACAAGTTATT GTAGAATAA
 
Protein sequence
MIKKIAAASI VGIVIIVSLA VAFSTEMEPQ PEPQPESNAV SSHSMQGVIQ PDVMTGGDVI 
MPTKVSRPGC EETDRCYIPS VITISAGESV TWVNEDSAFH SVTSGFYDAP QDLFDSGHMD
PFDSYTLTFD EPGTIDYYCT LHPWMEGQVI VE