Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1443 |
Symbol | |
ID | 5773430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1313572 |
End bp | 1314030 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641317090 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_001582777 |
Protein GI | 161528951 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAAAAA AAATTGCTGC AGCAAGCATA GTTGGTATAG TAATCATTGT GTCCCTTGCT GTTGCTTTTT CAACTGAGAT GGAACCACAG CCAGAACCGC AACCTGAATC AAACGCTGTC TCCTCTCATT CCATGCAAGG AGTCATACAA CCTGATGTTA TGACTGGAGG CGATGTTATC ATGCCAACCA AAGTCTCACG ACCTGGATGT GAAGAAACTG ACAGATGCTA CATTCCATCT GTAATTACAA TTAGTGCAGG AGAATCTGTA ACGTGGGTAA ATGAGGATTC AGCATTTCAC AGTGTAACTT CTGGATTCTA TGATGCACCA CAAGATCTTT TTGATAGCGG ACACATGGAT CCATTTGATT CCTATACGCT AACCTTTGAT GAGCCAGGAA CTATTGATTA CTATTGCACC TTGCATCCTT GGATGGAAGG ACAAGTTATT GTAGAATAA
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Protein sequence | MIKKIAAASI VGIVIIVSLA VAFSTEMEPQ PEPQPESNAV SSHSMQGVIQ PDVMTGGDVI MPTKVSRPGC EETDRCYIPS VITISAGESV TWVNEDSAFH SVTSGFYDAP QDLFDSGHMD PFDSYTLTFD EPGTIDYYCT LHPWMEGQVI VE
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