Gene Nmar_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1430 
Symbol 
ID5773493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1303197 
End bp1303586 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content40% 
IMG OID641317076 
Producthypothetical protein 
Protein accessionYP_001582764 
Protein GI161528938 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1383] Ribosomal protein S17E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAGAA TAAAGCGACT TTCATACGAA GTTTTAGAGA CTCACAAGTC AAAGTTCGGT 
GAAGATTTTG CTGATAACAA AAAAATTCTA AATGAAGTAT CCATAGTCCG CTCAAAGGGA
CTCAAAAATG AGATTGCAGG TTACATTACA AACTATATCA AAAAAGAGAT TCGAGAAGAA
AAGGCAAAAA AAGCACAAGC TGAAGCTTCC AAATCCCTAG AGCAAGAAGC TCAAGTAGAA
CCTGAACCAG TAGAAGCAAC TGAAAACACA GAAGCACCTG CTGCAGAAGA AACTCCTGAA
ACTGAAGCCC CCGCAGTAGA AGCAACTGAA AACACAGAAG CACCTGCTGC AGAAACAACT
CCTGAAACCC CAGAAGAAAA ATCTGAATAA
 
Protein sequence
MDRIKRLSYE VLETHKSKFG EDFADNKKIL NEVSIVRSKG LKNEIAGYIT NYIKKEIREE 
KAKKAQAEAS KSLEQEAQVE PEPVEATENT EAPAAEETPE TEAPAVEATE NTEAPAAETT
PETPEEKSE