Gene Nmar_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1420 
Symbol 
ID5774656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1297338 
End bp1298339 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content40% 
IMG OID641317066 
Productadenylosuccinate synthetase 
Protein accessionYP_001582754 
Protein GI161528928 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTA CTGTTGTAGT TGGTGGATTT TTTGGAGATG AAGGAAAAGG AAAGATCATC 
TCCTATTTGG CAATAAAAGA TAATCCCAAA GTTATAGTTC GTGGCGGTGC AGGACCAAAT
GCCGGTCACA CAATCAAAGA TGGCGATAAA GTTTACAAAG TTCGTATGCT TCCAAGCGGT
TTTCTAAACA AAGATGCCAA AGTCATGATT GGCCCAGGTG TTGTGATTAA TCCTGAAGTA
CTGCAAAAAG AGATTGATGA TTTTGGTGTC TCAGGACGTG CATTTATTGA CAAACATTGT
GGAGTTATTG AAGAGACTCA TCTTGCTCGA GATTCCAAAG GTGAACTCAA AGAGAAGATT
GGTAGTACCG GCTCAGGAAC AGGACCTGCA AATGCTGATA GGGCAATGAG GGTTTTGAAC
TTGGCAAAAG ACTTTGATTC ACTATCCTCA ATAATTACAG ATGTTCCAGC CGAGATTAAT
TCTGCTATAG ACAAAAACGA AAATGTCCTA ATTGAAGGAA CTCAAGGCAC ATTCCTATCT
TTGTGGCATG GTACATATCC ATTTGTAACC TCAAAGGATG TTACAGCTTC AGGAATTTGT
GCTGATATTG GATTAGGTCC AACCAAAGTA GATGAAGTGA TTGTTGTCTT CAAGTCTTAT
GTTACGCGTG TAGGCACGGG CCCACTTGAC AAAGAACTCT CACTTGAAGA AGCAGAAAAG
AAAGGCTGGT CTGAGTTTGG AACTGTTACA GGACGTCAAC GTCGTGCAGC TGATTTTGAT
TTTGATTTAG CTAGGCGTGC AATCATGCTT AATGGTGCAA CACAAATCTC AATTACAAAA
CTAGATGTGT TGTTTACAGA CTGTGCGGGA AAAACTTCGT ATGATGAATT GTTTGATGAT
GCAAAAGCAT TCATAAAAAA TATTGAAGAT GAATTAAACA CGCCTGTTAC AATTATTGGA
ACAGGACCAA CTGTCAATGA TGTCATTGAC AGAAGAAACT AG
 
Protein sequence
MTSTVVVGGF FGDEGKGKII SYLAIKDNPK VIVRGGAGPN AGHTIKDGDK VYKVRMLPSG 
FLNKDAKVMI GPGVVINPEV LQKEIDDFGV SGRAFIDKHC GVIEETHLAR DSKGELKEKI
GSTGSGTGPA NADRAMRVLN LAKDFDSLSS IITDVPAEIN SAIDKNENVL IEGTQGTFLS
LWHGTYPFVT SKDVTASGIC ADIGLGPTKV DEVIVVFKSY VTRVGTGPLD KELSLEEAEK
KGWSEFGTVT GRQRRAADFD FDLARRAIML NGATQISITK LDVLFTDCAG KTSYDELFDD
AKAFIKNIED ELNTPVTIIG TGPTVNDVID RRN