| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1416 |
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| Symbol | |
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| ID | 5774373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1294697 |
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| End bp | 1295488 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641317062 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001582750 |
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| Protein GI | 161528924 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATTAGTAAAA TCAAAGATGT ACTCCTCCAA TTATCGGGTC TTTACAAAAT TTATGGAAAA
AGACTAGAAA GTGAGATTCA AACTGGAGAC ATTCCAAATC ATGTTGCATT AATTTTAGAT
GGAAATCGTA GATGGGCCAA AAGACATCTG TCACTTCCAA AGGCAGGACA CTGGAAGGGA
GCTGATGCAG TAGAGAACCT TCTTGATTGG TGTGAAGAGT TTAACATCAA AATTGTAACG
CTGTATGCAT TATCAGCTGA AAACTTGGAT AGAAATGATG AAGAACTTGA TCATCTCTAC
GAGTTAATTC GCATGAGGTT AGAAAAGCTG TACAACGATC CACGAATTCA TCGATCAAAG
ATGAGAGTAA AGGGTATTGG AAGAATAGAG TTGCTGCCTG ATTCCATCAA AGAGATTTTA
CAAAAGTTAG ATGATGCTAC TAAAGACTAT GACAATCATT TCCTAAACAT TGCACTAGCA
TATGGTGGAC AGTATGAACT AGTTGATGCT GTCAAAAAGA TAGGTGAAAA AATCAAAGAC
GGTCAGTTAG ATGTTGAAAA GATTACAAAA AAAGAGATTG AATCAAACTT GTATACATCA
CACTTGCCAC AGTCATCACC AGACATGATT TTGAGAACAT CAGGTGAAAA AAGACTCAGT
GGGTTTTTGA TGTGGCAAAG CGCATACAGT GAATTAGTTT TTATGGATAT CTTTTGGCCA
GAGTTTAGGA AAATAGATTT GATGCGAGCC ATTAGAACAT TTCAAGAAAG AAAAAGAAGA
TTAGGAAAAT GA
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| Protein sequence | MSKIKDVLLQ LSGLYKIYGK RLESEIQTGD IPNHVALILD GNRRWAKRHL SLPKAGHWKG
ADAVENLLDW CEEFNIKIVT LYALSAENLD RNDEELDHLY ELIRMRLEKL YNDPRIHRSK
MRVKGIGRIE LLPDSIKEIL QKLDDATKDY DNHFLNIALA YGGQYELVDA VKKIGEKIKD
GQLDVEKITK KEIESNLYTS HLPQSSPDMI LRTSGEKRLS GFLMWQSAYS ELVFMDIFWP
EFRKIDLMRA IRTFQERKRR LGK
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