Gene Nmar_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1412 
Symbol 
ID5773564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1292013 
End bp1292435 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content35% 
IMG OID641317058 
Producttranslation initiation factor IF2/IF5 
Protein accessionYP_001582746 
Protein GI161528920 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain 
TIGRFAM ID[TIGR00311] translation initiation factor aIF-2, beta subunit, putative 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAAG CAGAATATGA GAATCTACTC AAAAGGATAC AGGATAAACT AGGTGATACT 
GAAAAGACCT CTACTGCTAG GTTTGAACTT CCTGTTGTTG ATGTGATGTG GGAAGGACAG
AAGACTTTCT TGCGTAATTT CTCTGAATTC CCAAAAGTGC TTAGAAGAGA TCCTGATAAA
GTATTACAGT ACCTTTCAAA AGAATTTGCA GTTCCTGCTG AAAGAATTGG TGATAAGGCC
ATGTTTATTG GAAAGCGTGA TCCTGATGAT TTTACTAGAT TATTTCAAAT TTATGTTAAA
GATTATCTTG AATGCCCTAC TTGCAAAAGT CCTGATACCA AGATACTAAA AGAAAATCGC
ATATCATTTT TGATTTGTGA AGCATGTGGT GCAAAATCAA CTCTAAAAGG TAAATATGCA
TAA
 
Protein sequence
MTKAEYENLL KRIQDKLGDT EKTSTARFEL PVVDVMWEGQ KTFLRNFSEF PKVLRRDPDK 
VLQYLSKEFA VPAERIGDKA MFIGKRDPDD FTRLFQIYVK DYLECPTCKS PDTKILKENR
ISFLICEACG AKSTLKGKYA