| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1409 |
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| Symbol | |
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| ID | 5774496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1290312 |
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| End bp | 1290884 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641317055 |
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| Product | putative RNA-processing protein |
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| Protein accession | YP_001582743 |
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| Protein GI | 161528917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
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| TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTG AGAAATTACT ACGAATTCCA AATGACAGGA TAGCAGTACT CATTGGGAAA
TCTGGAAACA TTAAATCTAA AATTGAAAAA TCATGTCATG TGTCTTTAGA TATAGATGGT
GAGACTGGAG AAGTTCTCAT AAAGTCTGAT GGTGATGTTG AAAAGATCCA ACCATTCAAA
GCGATGGAAA TTGTTACAGC AATTGGTAGA GGTTTTTCTC CTGAAAACGC TATGACCTTG
TTAAAGGGAG AGAACACATT GCATGTTATA GATCTTCGAG AGTTTGCTGG AAAATCTAAT
GCAAATGTTG AAAGGATAAA AGGGAGAATT ATTGGAGAAG GTGGTAGAGC AAGAAGAAAT
ATGGAAAATC TTAGCAGTAC TCATATCTCA GTTTATGGAA AAACAGTTTC AATTATTGGT
GATGCAAGTA AATTACGATT AGCAGTTGAT GCAATCTCTT CTATTTCCAG TGGAAGTATG
CATGGTGCAG TTTATGATAA ATTAGAAGCT GCAAATAGAA AAGAAAAACA AGAAAAAATG
AAGTTGTGGG AAGATCAAGA TGTCTTCTAT TAA
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| Protein sequence | MSFEKLLRIP NDRIAVLIGK SGNIKSKIEK SCHVSLDIDG ETGEVLIKSD GDVEKIQPFK
AMEIVTAIGR GFSPENAMTL LKGENTLHVI DLREFAGKSN ANVERIKGRI IGEGGRARRN
MENLSSTHIS VYGKTVSIIG DASKLRLAVD AISSISSGSM HGAVYDKLEA ANRKEKQEKM
KLWEDQDVFY
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