Gene Nmar_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1400 
Symbol 
ID5773543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1284188 
End bp1284700 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content33% 
IMG OID641317046 
Productadenine phosphoribosyltransferase 
Protein accessionYP_001582734 
Protein GI161528908 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAA GAGACAAAAT TGCAGAATAT CCAAATTTTC CAAAAAAAGG GATTTTATTT 
AGAGACTTTA GTCCAATCCT AAAAGATCCA TCAGCAATGG AATCAATTGC AGATGAATTT
TCAAAGTATT TTCATCCAAA AAATATCGAC ATATTTGCAG GAATAGAATC AAGAGGATTC
ATTTTAGCAT GTATTCTAGC CACAAGATAC AACAAGGGAA TGATGATGAT TAGAAAAGCA
GGAAAACTGC CTGGAAAGAC TACAAAAATT TCATACACAA TTGAATATGG TAAAGACACA
ATAGAAATTC AAAAAGATAT CATTGAAGAA GGGCAAAGAG TGCTCATTTG TGATGATTTG
TTAGCTACCG GTGGAACTGC CAAGGCAGCT GCAAAACTAA TTGAAAAAGT TGGAGGAAAA
ATTGTAGGTT TTGCATTCAT CATAGAACTA ACCGATCTCA ATGGAATGAA AGGTATTAGC
AAATACGATT GTAAATCACT GGTGAAATAT TAA
 
Protein sequence
MNLRDKIAEY PNFPKKGILF RDFSPILKDP SAMESIADEF SKYFHPKNID IFAGIESRGF 
ILACILATRY NKGMMMIRKA GKLPGKTTKI SYTIEYGKDT IEIQKDIIEE GQRVLICDDL
LATGGTAKAA AKLIEKVGGK IVGFAFIIEL TDLNGMKGIS KYDCKSLVKY