Gene Nmar_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1385 
Symbol 
ID5774475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1267663 
End bp1268718 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content37% 
IMG OID641317031 
Productradical SAM protein 
Protein accessionYP_001582719 
Protein GI161528893 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATC TTTATCGATT ACTTCCTGAG GAAATGGAAA AATTAGTAAT TGATATGGGT 
TATGATAGAT ACAGAGCAGA CCAAATCTTA CTTCCACTCT ATTACAAATT CCCAAAAGAC
ATTAACGATA TTCCTCAACT TCCAAAAAAA TTACGAGAAG AATTTACAGA AGCAGGCTAC
ACCATTGGTT CAGCAAAAGA AATTCATCGT GTCGTAAGTG ATGATGGTGA TACTACTAAA
TTATTGTTGG AACTATCTGA TGGCTCTTCA GTTGAAACTG TTCTAATGCA ATACGAGCCA
ACAAAAATTG GTGGTCATCC AAGATCAACT ATCTGTGTTT CAACACAAAT AGGGTGTGCA
ATGGGTTGTG TATTTTGTGC AACTGGACAA ATGGGTTTTG AAACAAATCT AAAAGCTGAA
CACATTGTAT CTCAAGTAAT TCATTTTGCT GAACTTTTAG AACAACGTGG AGAACATGTT
ACAAACCTGG TCTTTATGGG AATGGGCGAA CCAATGGCAA ATTATGATGA AATGATTCGA
GCTGTAAAAA TTCTAACACA TGACAGAGGT TTTGGATTAG GACAAAGACA CATTACAATT
TCTACTATTG GCATTACATC TGGAATTGAA AAACTAGCTG AAGAAAATCT TCAGATTGGT
CTTGCCATTT CGCTTCATGC ACCGAACAAT GAATTACGAA AAAAACTTGT TCCAACTGCA
GGACCTAACT CTGTTGAAGA CATCATAAAA TCTGGACGAG ATTATTTTAA AAAAACTGGA
CGACGTGTCA CATTTGAGTA TGCTCTGATG GAAGGAGTCA ACGACTCTCC GGAAATTGCT
CATGAACTTG CAAGACTTTT GAGAGGAAAC GGCTCACACG TCAACATTAT TCCAATTAAT
CCTACTGCTG GTGACTTTAA GCGTCCATCT GAGAAAAATG TCTTAGAATT TGAGCAAATA
TTGCGAAAAT CTGGCGTAAA TTGTACTGTA CGTGTGGAAA AAGGTACAGA GATCTCAGCT
GCCTGTGGAC AACTACGAAC CGATATTGTA GGTTAA
 
Protein sequence
MTDLYRLLPE EMEKLVIDMG YDRYRADQIL LPLYYKFPKD INDIPQLPKK LREEFTEAGY 
TIGSAKEIHR VVSDDGDTTK LLLELSDGSS VETVLMQYEP TKIGGHPRST ICVSTQIGCA
MGCVFCATGQ MGFETNLKAE HIVSQVIHFA ELLEQRGEHV TNLVFMGMGE PMANYDEMIR
AVKILTHDRG FGLGQRHITI STIGITSGIE KLAEENLQIG LAISLHAPNN ELRKKLVPTA
GPNSVEDIIK SGRDYFKKTG RRVTFEYALM EGVNDSPEIA HELARLLRGN GSHVNIIPIN
PTAGDFKRPS EKNVLEFEQI LRKSGVNCTV RVEKGTEISA ACGQLRTDIV G