Gene Nmar_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1383 
Symbol 
ID5773341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1266978 
End bp1267304 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content32% 
IMG OID641317029 
ProductRNA polymerase Rpb4 
Protein accessionYP_001582717 
Protein GI161528891 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAG TACAAAAGAA ACAAGCTATT TCTCTTTCAG AAGTTAAAGA AATCTTAGGC 
AAAGTTGATC CTGAAGAAAT GGACCAAATT CAACGTTGGA CCTATGATTA TGTTTCAAAA
TTTGTATCAC TTGATCCTAA AGATGCTAAA GAGATGAAGA AAAAACTCAT CAAGGAATGT
GAATTGACAG AAGACGAAGC TGTTGAAATT GTTAACATTA GACCAACAAG TATGGCAGAA
TTACGTTCTT TCACCTTTGG TTGGAAAAAA TTAATTCTTG CTGAAACTCT AGAAAAAATG
CTCAAAATAA TCAAGGAGCA TTCTTAA
 
Protein sequence
MEEVQKKQAI SLSEVKEILG KVDPEEMDQI QRWTYDYVSK FVSLDPKDAK EMKKKLIKEC 
ELTEDEAVEI VNIRPTSMAE LRSFTFGWKK LILAETLEKM LKIIKEHS