Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1383 |
Symbol | |
ID | 5773341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1266978 |
End bp | 1267304 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641317029 |
Product | RNA polymerase Rpb4 |
Protein accession | YP_001582717 |
Protein GI | 161528891 |
COG category | [S] Function unknown |
COG ID | [COG1460] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAG TACAAAAGAA ACAAGCTATT TCTCTTTCAG AAGTTAAAGA AATCTTAGGC AAAGTTGATC CTGAAGAAAT GGACCAAATT CAACGTTGGA CCTATGATTA TGTTTCAAAA TTTGTATCAC TTGATCCTAA AGATGCTAAA GAGATGAAGA AAAAACTCAT CAAGGAATGT GAATTGACAG AAGACGAAGC TGTTGAAATT GTTAACATTA GACCAACAAG TATGGCAGAA TTACGTTCTT TCACCTTTGG TTGGAAAAAA TTAATTCTTG CTGAAACTCT AGAAAAAATG CTCAAAATAA TCAAGGAGCA TTCTTAA
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Protein sequence | MEEVQKKQAI SLSEVKEILG KVDPEEMDQI QRWTYDYVSK FVSLDPKDAK EMKKKLIKEC ELTEDEAVEI VNIRPTSMAE LRSFTFGWKK LILAETLEKM LKIIKEHS
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