Gene Nmar_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1371 
Symbol 
ID5774239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand- 
Start bp1256918 
End bp1257538 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content40% 
IMG OID641317016 
Productcation efflux protein 
Protein accessionYP_001582705 
Protein GI161528879 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACG ATGATGATTT ACCAAAAGAT CTTGCTCATA TCACACCTGC ATACAAACGC 
GCATTATGGG TTGTCGTTTT AATCAATGTA GGTTACGGGG TTGCCGAAAT GATTGGGGGA 
TTCTTGGCAG ATTCTCAAGC ACTCAAAGCT GACGCACTTG ATTTTCTAGG TGACGGGTCA 
ATCACATTTT TAGGATTACT TGCAATAGGA TGGGGTCTTA GATTACGTGC TCGCTCAGCT 
TTACTCCAAG GAATATTCCT TGGTGCAATG GGAATTGCAG TACTTGGATA TACAATATAT 
CGCACACAAG TTTTGCATGT TCCAGAAGCT GGAATGATGG GAGTCTTTGG CTTTGGTGCA 
CTTTTGATAA ATGTAATTGC AGTTATCATA TTGCTTCCAC ATCGAAAAGG TGACGCAAAT 
GTACGTGCAG TATGGCTCTT TAGTCGCAAT GACGCACTTG GCAATATTTT GGTAATAGTT 
GGTGCAGGTT TTGTATTTTT GACAGGAACA TCCTACCCTG ATCTTATAGT AGCTGGAATA 
ATTGCAAGTC TCTTTTTACA ATCATCATTC TCAATCATTA AGGACGCTAG AAATGATCTA 
AAACAATCCG AGTCATCATA A
 
Protein sequence
MPDDDDLPKD LAHITPAYKR ALWVVVLINV GYGVAEMIGG FLADSQALKA DALDFLGDGS 
ITFLGLLAIG WGLRLRARSA LLQGIFLGAM GIAVLGYTIY RTQVLHVPEA GMMGVFGFGA 
LLINVIAVII LLPHRKGDAN VRAVWLFSRN DALGNILVIV GAGFVFLTGT SYPDLIVAGI 
IASLFLQSSF SIIKDARNDL KQSESS