Gene Nmar_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1368 
Symbol 
ID5774005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1254350 
End bp1255168 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content30% 
IMG OID641317013 
Producthypothetical protein 
Protein accessionYP_001582702 
Protein GI161528876 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.880811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAAG AGTTTGATCC ATTTGTTGCA GAATGGTTTT CATTTGTAAA AAATCCAAAT 
TTCAATCTAG TTGAAAAGTG TCTCAAGTTT GCACAGATTC TAGAATATCC AGATCTTGAT
ATTGAAAAAC ACATTGAAAA GATCACCAAA ATTGGAATGT CTCTTAAAGA GTCAATTAGT
GATGTAAAAA ATCCAACATA TCTCATATCA ATGCTAAATG AACATCTCTT TGAAAATCTA
GGATATAGTG GAGATGATGA TGACTATTAC AATCCAAAAA ATAATTTTCT AAACGAAGTA
ATAGATAAAA AAACAGGACT GCCAATTACA ATATCGATTC TTTATGCAGA AGTAGCAAAG
TTTATTGGAT TGGATCTCAA AATTGTAGGA TTTCCAAGTC ATATTCTGGT AAAATACAAT
GAAGAGATGA TACTAGACCC ATTCTATGAT GGACGATTAT TAGACATTGA TGACTTGCAA
GAGATTCTTG ATACAAATTA TGGTGGAGAG ATAGAGTTTA AACCTGAATT TTTAGACGAG
ATAACACATG AACAAATTCT GGTTAGACTA ACTCGTAACT TGAAGAATTC CTATGTTCAA
TCTTTTGTTT ATGACAAAGC ATTACGTTGC GTCAATATGG TATTAGCAAT TGAGCCAGAA
TCACCTGATG ACATAAGGGA CAAAGGAATA CTAGAAGAAA GATTGCTAAA TTATGATAGT
GCTTTAAAAT ATTTGAATAA ATATTTGGAA ATTAATCCAA ATGCAGAAGA TGTAGATTTT
ATTTTAGAAT TGATTAGAAG TATAAAGACA AAAAATTAA
 
Protein sequence
MEKEFDPFVA EWFSFVKNPN FNLVEKCLKF AQILEYPDLD IEKHIEKITK IGMSLKESIS 
DVKNPTYLIS MLNEHLFENL GYSGDDDDYY NPKNNFLNEV IDKKTGLPIT ISILYAEVAK
FIGLDLKIVG FPSHILVKYN EEMILDPFYD GRLLDIDDLQ EILDTNYGGE IEFKPEFLDE
ITHEQILVRL TRNLKNSYVQ SFVYDKALRC VNMVLAIEPE SPDDIRDKGI LEERLLNYDS
ALKYLNKYLE INPNAEDVDF ILELIRSIKT KN