Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1360 |
Symbol | |
ID | 5773497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1246835 |
End bp | 1247611 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641317005 |
Product | hypothetical protein |
Protein accession | YP_001582694 |
Protein GI | 161528868 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.412374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA AACAACTAAC AGTTGTAATG CTTTCTGTAT TGGTAGTTGC AGTGTCTGCA ACTGCCGTAT CATCAGAGGC AGATGCACAA AAGCCAACAT CAATGCTATC TTTTGAAAAA ACCATTGACG TTGTAGGAAT AGGAATGATT TCCACAGATC CTGATCTTCT AACAATTCGA TTGGGACTGG AGACCAAAGG CGATACTGCA AATGATGCAC TGACTGCAAA TTCTGCCCAG ATGAGCAAAA TACTACAGGC CTTAAAGAGC GTGGGCATTT CTGAATCAGA AATCAGCACG TCATCACTAA ACATTCGTCC ACAGTACGAA TACGTTTACG ATGAAACACG TGACAGAGAC ACAAGAACGC TTGTAGGATA CGAGGCATCC AACATCGTCA CAGTAGAGAC AAAGAGTCTT GACTTGGCAG CATCAATCAT TGACGCATCA GTTAATGCAG GCGCAAACAA AGTAGACTCT GTTTACTATT CACTGTCTAC TGAAACCCAG ATGAGTCTCA AAGACCAGCT TCTTGAGCAG GCCGTAATCA ATGCACAGGA AAAGGCCAAA AATGTATTAG CTCCACTTGA CCAGAAAATA ATTGGTGTAA AGAGCATCTC TGTTTCTGAA TTTGGAATTC CAACACCATA TCCAGTATTT AGCGGCAGCA ATATGGTCTT TGATGCAGCA ATGAAGAGCA GTTCAACACA GCTGTTCTCA TCAGAACAAG ATGTCACAGC ATCAGTTCAC GTTGTCTTCC ACATAGGAAG CAACTAA
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Protein sequence | MNKKQLTVVM LSVLVVAVSA TAVSSEADAQ KPTSMLSFEK TIDVVGIGMI STDPDLLTIR LGLETKGDTA NDALTANSAQ MSKILQALKS VGISESEIST SSLNIRPQYE YVYDETRDRD TRTLVGYEAS NIVTVETKSL DLAASIIDAS VNAGANKVDS VYYSLSTETQ MSLKDQLLEQ AVINAQEKAK NVLAPLDQKI IGVKSISVSE FGIPTPYPVF SGSNMVFDAA MKSSSTQLFS SEQDVTASVH VVFHIGSN
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