Gene Nmar_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1356 
Symbol 
ID5774352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1242610 
End bp1243134 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content41% 
IMG OID641317001 
Productflavodoxin FldA 
Protein accessionYP_001582690 
Protein GI161528864 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.267183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTG GAATTTACTT TGGCTCACAG ACTGGCAAGA CTGAGTTGGT ATGTGCTAAG 
ATAAAAAGCG AATTGGGTGA TGCAGTTACA GACCCAAAAG ACGTTTCTGA GCTTGGAGAA
GATCCAAGTC AATTCCTAGA AATGGATGGA CTCATTTGTG CCATACCAAC ATGGAATACT
GGTGAAGATG AAAACAGATC AGGTACTGCT TGGGATGATC TGTTGGAAAA AATTGGCGAG
TTAGACCTCA AAGGCAAACC CGTTGCAATA TGTGGCTTGG GTGATGCTGC AGGTTATGCT
GACAATTTTG TTGATGCAAT GGAAGAGTTG CACAGGTATT TTCAAAAAGC TGGTGCAAAA
ATGGTAGGAT ATGTGAGCAC TGATGGTTAT ACTTTCACAG GTTCAAAAAG CGTTATTGAT
GGCAAGTTTT GTGGACTGCC AGTTGATGAA GACAGTGAAT CAGAACATAC TGATGAAAGA
GTCACAAAGT GGTGTTCCCA ACTAAAATCT GAAATGGGAT TGTAA
 
Protein sequence
MTVGIYFGSQ TGKTELVCAK IKSELGDAVT DPKDVSELGE DPSQFLEMDG LICAIPTWNT 
GEDENRSGTA WDDLLEKIGE LDLKGKPVAI CGLGDAAGYA DNFVDAMEEL HRYFQKAGAK
MVGYVSTDGY TFTGSKSVID GKFCGLPVDE DSESEHTDER VTKWCSQLKS EMGL