| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1345 |
|---|
| Symbol | |
|---|
| ID | 5773101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1232130 |
|---|
| End bp | 1233425 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641316990 |
|---|
| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
|---|
| Protein accession | YP_001582679 |
|---|
| Protein GI | 161528853 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases
[TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0209053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA TCAACACAAT TGAATCTCAG GTGAGATCCT ACTGTAGGGC ATATCCTGTA
ATGTTTGAAA AAGCAAAAGA TCATCTCTTA ATTGACAAAG ACGGAAAAAA ATATTTTGAC
TTTCTTTGCG GTGCTGGGTC ATTGAATTAT GGACACAACA ACCACATACT CAAAAAAGAA
ATCATTGATT ATCTGAACGA AGATGGCATC ACCCATAGTT TGGATCTTGC AACAAGATCA
AAAGAAGATT TCTTGAATTC ATTTTCAAAA TACATTTTGG AGCCAAGAAA TTTGGATTAC
AAATTACAAT TTACTGGCCC TACTGGCACT AATGCTGTAG AGGCGGCATT TAAAATTGCA
AGAAAAATTA CTGGCAGAAC AAAAATAATT TCTTTTACAA ACGGCTTTCA CGGCGTAACG
CTGGGAGCGC TTGCAGCTAC GGGAAACAGT CATCATAGAG GTGGTTCTGG AATTCCTCTA
AATGATGTCG TGTTTATGCC GTATGATGGT TACATGGGAA AGAAACTAAA CACAATTGAT
TATCTTAGAC GCTTACTAGA AGACAACAGC AGCGGAGTTG ATCTTCCTGC AGCTGTAGTC
TTAGAAACTG TTCAAGGTGA GGGTGGAATT AATATTGCAA GCTCAAAATG GCTTCAATCA
TTACAAGAAC TGTGCAAAGA ATTTGGAATT TTGGTGATAG TTGATGACAT CCAAGTCGGC
TGTGGAAGAA CTGGAAGCTT TTTCAGCTTT GAAGGGATGG GGATAGAGCC AGACATGATA
ACCTTGTCAA AATCACTTAG TGGTTTTGGA TTGCCATTTT CATTACTGCT GTTAAAGCCT
GGCATAGACA AATGGGAGCC TGGTGAACAC AATGGCACGT TTAGGGGAAA CAATATGGCT
TTTGTTACTG CAAAAACTGC CATTGAGCAA TACTGGGCAA ATGATGATCT TGAAAAACAA
ATTGCCACAA AATCTAATAT TCTAAAACAT AGGTTAGAGG AAATATCCGA TGAATTTCCT
TCTTCAGATA TTCAGGTTAG GGGGAAGGGA ATGGTGTATG GTATTGATTG CATACTAGAA
GATTTGGCTA GCGAAATTAA ACAAAAATGC TTTGAAAACG GTCTGATATT GGAGACATGC
GGTCCTGATG ATCAGGTTGT AAAACTTCTT CCACCTCTGA CCATTTCCGA AAGCAATCTG
ACAAAGGGGT TGGATATTTT GGAAAAAAGC ATCAAAGAAG TTATGCAAGA ATCTGATTTT
GATAAAAAAT TGACTATGGT GACTGTGCAA AAATGA
|
|---|
| Protein sequence | MKQINTIESQ VRSYCRAYPV MFEKAKDHLL IDKDGKKYFD FLCGAGSLNY GHNNHILKKE
IIDYLNEDGI THSLDLATRS KEDFLNSFSK YILEPRNLDY KLQFTGPTGT NAVEAAFKIA
RKITGRTKII SFTNGFHGVT LGALAATGNS HHRGGSGIPL NDVVFMPYDG YMGKKLNTID
YLRRLLEDNS SGVDLPAAVV LETVQGEGGI NIASSKWLQS LQELCKEFGI LVIVDDIQVG
CGRTGSFFSF EGMGIEPDMI TLSKSLSGFG LPFSLLLLKP GIDKWEPGEH NGTFRGNNMA
FVTAKTAIEQ YWANDDLEKQ IATKSNILKH RLEEISDEFP SSDIQVRGKG MVYGIDCILE
DLASEIKQKC FENGLILETC GPDDQVVKLL PPLTISESNL TKGLDILEKS IKEVMQESDF
DKKLTMVTVQ K
|
|---|
| |