| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1341 |
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| Symbol | |
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| ID | 5774277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1229190 |
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| End bp | 1230119 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316986 |
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| Product | transcription factor TFIIB cyclin-related protein |
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| Protein accession | YP_001582675 |
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| Protein GI | 161528849 |
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| COG category | [K] Transcription |
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| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00144116 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCAAG TTCTGGAATA TTGTTTTAAG AACAACCACA CATCTCCGAT TACAGACATC
ACTACAGGTG AGATTTGCTG CAGTGATTGT GGTACAGTTA TTGTTGAAAA AACTATTGAC
CGTTCAAACG GTTTACCTGC CAATACAAAA GAAGATTTTA TGAATAGAAC TCAATACGGC
CCTCCAACTA AAATTGCAAT CTCAGACATG TCAAAGACAT CAATGATTTC AAAGAAAAAC
CAGGATTCTG CAGGACAAAA ACTGCACAGT GATGCAAAAA GGCATTTTTC ACGACTAAGA
TTGTGGGATT CACGCAGCAA GTCTGACAGA GCCGAAAGAA ATCTTGTAAA AGCATTTTCA
ATACTAGACG CATATGCAAG TAATTTGGGC ATTCCAGAAA ACGCAAAAGA ACATGCAGCA
TATATCTACA GAAAGGCACT GGAGAAGAAC CTCATAAGAG GAAGCTCAAT TCATACAATG
GTAGCAGGCT CTGTTTATGT GACATGCAAG CAACTTGGAA TTCCGAGAAG TGCAGACGAT
ACAACAAGAG TGTCCAACAT CAGCAGAAGA AGGTTGTCAA AAGCATACAA ACGTCTTGTA
AAAAATCTGG ACCTGAAAAT TGATCCTTCA GAAACAGATT TTGTGACGCA GGTTGCCAAC
TCATTGTCTG TCAGTGAAAA AACAAAACGG CTTGCAATAA AAATAATCAA CGATGTCAAA
AAAGAAAAAA TACATGTAGG AAAAAGACCT CTTGGGATTA CGGCTGCAGC TGTGTATCTT
TCTGCAATAA ATTATGACGA GCCAAAGTCC ATGGCAAAAA TTTCAAAGGT AACCAACATA
AGCACAGTTA CAATTAGAAA AATAATAAAA CTAGTAAGAC CATTTGCTGC CAAATACATC
AAAAGCATTG ATGTTGGAAT AACACAGTAA
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| Protein sequence | MKQVLEYCFK NNHTSPITDI TTGEICCSDC GTVIVEKTID RSNGLPANTK EDFMNRTQYG
PPTKIAISDM SKTSMISKKN QDSAGQKLHS DAKRHFSRLR LWDSRSKSDR AERNLVKAFS
ILDAYASNLG IPENAKEHAA YIYRKALEKN LIRGSSIHTM VAGSVYVTCK QLGIPRSADD
TTRVSNISRR RLSKAYKRLV KNLDLKIDPS ETDFVTQVAN SLSVSEKTKR LAIKIINDVK
KEKIHVGKRP LGITAAAVYL SAINYDEPKS MAKISKVTNI STVTIRKIIK LVRPFAAKYI
KSIDVGITQ
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