| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1326 |
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| Symbol | |
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| ID | 5773228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1217102 |
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| End bp | 1217617 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641316971 |
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| Product | transcriptional regulator TrmB |
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| Protein accession | YP_001582660 |
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| Protein GI | 161528834 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3398] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000018018 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGAAG TGCTGGCATC TCCAAAAGAG AAGATTTTGG ACTTTATAAT AAACAATCCA
GGGTCTCATT TGAGAATGAT AAAAAAGAAT GTTCAGTTCT CTATGGGTAC AGTTCAATAC
CATCTAAACA CACTTGAAAA AGAAGGCAAG ATAAAATCAA GTAAAACAAG ATTTTACAAA
AATTACTACC ACATAAACGA GTCTGATGAA AAACTGTTAT CTGTTTTCAA CTTGGAATCC
CCACGAAGCA TAATCATGTA TTTGCTTCAA CATCAGCCAT CTACGCATCA GGAGATAGCA
AAAGGAATAG AGTTATCATC ATCAACTGTG AGCTGGCACA TGAAAAGATT GTTAGAATCA
AATATTGTAG AATCAGAATA CTCAGGAAAA TATACCCTAT ATCGTCTAGT TGACAGAGAA
AAAGTGTTAG AGAATCTCAA AAAATGCAGT TCAACAACAT GGAACTCTAT GATCAACAGC
ATGGTAGATA TATTTTCAGC ATTTGAGCAG AAATAG
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| Protein sequence | MDEVLASPKE KILDFIINNP GSHLRMIKKN VQFSMGTVQY HLNTLEKEGK IKSSKTRFYK
NYYHINESDE KLLSVFNLES PRSIIMYLLQ HQPSTHQEIA KGIELSSSTV SWHMKRLLES
NIVESEYSGK YTLYRLVDRE KVLENLKKCS STTWNSMINS MVDIFSAFEQ K
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