| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1319 |
|---|
| Symbol | |
|---|
| ID | 5773163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1205088 |
|---|
| End bp | 1205864 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641316963 |
|---|
| Product | DNA methylase N-4/N-6 domain-containing protein |
|---|
| Protein accession | YP_001582653 |
|---|
| Protein GI | 161528827 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000000125948 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGAGATTAA CAAAATTTAC AATCAAAATT GTATTGATGG AATGAGTTCT
ATTCCTAAAA ACAAGATTGA CTTGGTTATT ACCGATCCAC CATTTGCCAT AAATTTCAAG
GCAAAAAAAG CAAATTACAA CAGAACATCA TCTCGTGTTC TTTCTGGATA TAATGAAATC
AAACCTGAGG ACTACTATGA CTTTACATTT TCATGGATGA CTGAAGTTTA TCGAATCCTA
AAGGATTCTG GAAGCATGTA TGTATTTTCA GGATGGAATA ATCTCAAAGA TATTTTACGA
GCCTTGGATG ATGTTGGATT TGTTACCATT AATCACATAA TCTGGAAGTA TCAATTTGGT
GTAGTTACAA AAAAGAAGTT TGTCACATCT CACTATCATT GTCTTTATGT CTGCAAAGAT
GACAAAAAAA GAAAGTTCTT TCCATTTTCT AGGTTCAAAA AAGAAGATAA AACAAAGGAT
GGTCGCAGTC TTCACTACAA AGACAAGGAA GATGTGTGGG ATATCAAACG AGAATACTGG
ACTGGGGATG AAAAAACTCC AACCAAACTA CCTTCTGAAT TAATTCAAAA AATCTTGGAA
TACTCTAGTG AGAAAAAAGA CATTGTGCTT GATCCTTTTA TTGGTTCAGG ACAAGTTGCA
GTTGTAAGTA AATCTCTTGG TAGAAGATAT CTTGGATTTG AAATTGTTCC AGACTATTAC
AAATTTGCAA AAAAACGACT TGACAAAGAC CTGTATCGAA TTAAAAAATC AAAATAA
|
|---|
| Protein sequence | MKKIEINKIY NQNCIDGMSS IPKNKIDLVI TDPPFAINFK AKKANYNRTS SRVLSGYNEI
KPEDYYDFTF SWMTEVYRIL KDSGSMYVFS GWNNLKDILR ALDDVGFVTI NHIIWKYQFG
VVTKKKFVTS HYHCLYVCKD DKKRKFFPFS RFKKEDKTKD GRSLHYKDKE DVWDIKREYW
TGDEKTPTKL PSELIQKILE YSSEKKDIVL DPFIGSGQVA VVSKSLGRRY LGFEIVPDYY
KFAKKRLDKD LYRIKKSK
|
|---|
| |