Gene Nmar_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1308 
Symbol 
ID5774537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1195786 
End bp1196547 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content38% 
IMG OID641316952 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001582642 
Protein GI161528816 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00000837602 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACTAG TTACCACATC TACTTCTGAT GGCATTTGTA CTGTCAAAAT CAACAGACCT 
GACAAACTCA ATGCTATGAA CACTGATGTT GCAAAAGAAC TAATCAAAAC TTTTGAAGAA
CTAAACCACA ATGATGATGT CAAAGTTATC ATTTTGACTG GTGAAGGTGA AAAAGCATTT
TCTGCTGGTG CAGACATTGA ATACATGTCA AAAATCTCTG CAGATGAATC AGTAGAATAT
GCAAAGACTG GTCAACTTGT TACTGCAACA GTTGAATTAG TTAAACAACC AACAATTGCA
GCCGTTAACG GTTTTGCATT AGGCGGTGGT TGTGAACTTG CAATGTCTTG TGATATTAGA
ATAGCAGCTG ATACTGCTAA ACTAGGTCAA CCAGAAGTAA CAATTGGTGT CCCTCCTGGA
TGGGGTGGAA CACAAAGATT GATGAGAATT GTGGGAATAG CAAAGGCAAA AGAACTTGTT
TACACAGGTA AAATGATCAA AGCTGAAGAG GCAAAAGAGA TTGGTCTTGT AAACCATGTC
GTTCCTCTTG CATCATTACA AGAAGAAGCT TTGAAAATGG CACAACAAAT TGCTGGAAAC
TCTACAATGG GTGTTCAGAT GTCTAAAGTT GCAATCAACA AGGGAAGAAA TGCAGACCTT
GATACTGGTC TTGGATTAGA AATCCTTGCT TGGAGAAACT GCTTTACACA TCCAGACAGA
CAAGAGAGAA TGACTGCATT TGTCAACAAG TCAAAGAAAT AG
 
Protein sequence
MSLVTTSTSD GICTVKINRP DKLNAMNTDV AKELIKTFEE LNHNDDVKVI ILTGEGEKAF 
SAGADIEYMS KISADESVEY AKTGQLVTAT VELVKQPTIA AVNGFALGGG CELAMSCDIR
IAADTAKLGQ PEVTIGVPPG WGGTQRLMRI VGIAKAKELV YTGKMIKAEE AKEIGLVNHV
VPLASLQEEA LKMAQQIAGN STMGVQMSKV AINKGRNADL DTGLGLEILA WRNCFTHPDR
QERMTAFVNK SKK