| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1290 |
|---|
| Symbol | |
|---|
| ID | 5773783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1181343 |
|---|
| End bp | 1182146 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641316934 |
|---|
| Product | acetylglutamate kinase |
|---|
| Protein accession | YP_001582624 |
|---|
| Protein GI | 161528798 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0548] Acetylglutamate kinase |
|---|
| TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0327535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACTA TCAAAATTGG TGGAAGTGTA GTAGATGATT TACATCCATC AACTATTGCA
GACATCAAAA AAATTGCAGA ATCAGAAGGA GTAATTCTAG TTCATGGTGG AGGTAAAGAA
GTTACCAAAG TTTGTGAACA ACTTGGAAAA GAACCAAAGT TTGTAACATC TCCTAGTGGA
ATCAAAAGTA GATACACAGA CAAAGAGACT GCAGAAATTT TCACAATGGT AATGTCTGGC
AGAATCAACA AAACAATTGT TCAAATGCTT CAAAAAAACG GCATCAATGC AATTGGACTA
TCAGGAGTTG ATGCCAAAGT CATAGAAGCA GACAGAAAAA AGAAACTCCT AATCGTAAAT
GAAAAAGGAC GAAAACAAGC TATTGATGGC GGTTATACTG GAAAAATCAG AGAAGTTAAT
GCTAGTTTCA TAAAATCACT CCTAGACCAA GGTCTCACGC CTGTAATTTC ACCTATTGCA
ATAAGCGAAG AGTCTGAATT TCTCAATGTA GATGGAGACA GAGCAGCAGC ATATGTTGCA
GGAAAGGTTG GAAGTGATAA AGTATTATTC ATCACAAATG TTGATGGTCT GTTAATGGAT
GACAAAGTTG TTCCAAAACT AACACTAGCA GAAGCAAAAG AAATTAGACC AAAAATTGGA
CCAGGAATGG AAAAGAAGAT TTTAGCATCA ACTGAGGCCC TAGACATGGG AGTTACAACA
GCATTAATTG CAAATGGTCA AAAAGAAAAT CCAATTTCAT CAGCCATTTC ACATGATAAT
TGTACGGTGA TTGAACATGA GTGA
|
|---|
| Protein sequence | MITIKIGGSV VDDLHPSTIA DIKKIAESEG VILVHGGGKE VTKVCEQLGK EPKFVTSPSG
IKSRYTDKET AEIFTMVMSG RINKTIVQML QKNGINAIGL SGVDAKVIEA DRKKKLLIVN
EKGRKQAIDG GYTGKIREVN ASFIKSLLDQ GLTPVISPIA ISEESEFLNV DGDRAAAYVA
GKVGSDKVLF ITNVDGLLMD DKVVPKLTLA EAKEIRPKIG PGMEKKILAS TEALDMGVTT
ALIANGQKEN PISSAISHDN CTVIEHE
|
|---|
| |