| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1288 |
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| Symbol | |
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| ID | 5774028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1179408 |
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| End bp | 1180265 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316932 |
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| Product | lysine biosynthesis enzyme LysX |
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| Protein accession | YP_001582622 |
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| Protein GI | 161528796 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family
[TIGR02144] Lysine biosynthesis enzyme LysX |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0210035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAAG TCTGTATTGT GTTTGATCGC CTAAGAGCGG AAGAGAAGAT GCTTCAAAAG
GAAGCATCTG AACTTGGACA TGATACTGTA ATGCTAGATG CAAAGATTAC TCAAGTCAAC
ACAGATAGTA AAAAAGAAGA TTTTGATTTG GGAGATGTTG TTTTAGAAAG ATGTGTAAGT
TACTTTAGAG GATTACACTT TACTGCAAGT CTTGAGTTTA TGGACATTCC TGTTCTAAAC
AAATTTGATG TTGCAAGTAT TTGTGGAAAT AAAATGTTCA TGACATTGCT TTTGAAAAAA
GCAGGAGTAC CAACACCAAA GACGTATTTT TCATTTACAA GTGAAAGTGC AGCTGAGAAT
TTAGAAAAAG CTGGATATCC ACTAGTAATC AAACCAGTAA TTGGTAGTTG GGGAAGAGGA
GTGATGCCAA TTAAAGACAG AGATACGTTT GATGCAATTT CTGAAATCAG AGATATTACA
GATAGTCCAC ATGATAGAAT TTACTATTTG CAGGAATTAG TAGAAAGACC ACCTAGAGAT
ATTCGAGTAA TTACTGTTGG AGATGAGCCT GTTGCAGCAA TGTACAGAAA GTCTTCAGGA
GGATTCAAGA CAAACATTGC ACTTGGTGCC GATCCAGAAC TTTGTGAGAT CACAAAAGAG
ATGGAAGATA TGGCAGCAAA AGCATCAAAA GCAATGGGAG GAGGAATCCT AGGAATAGAC
ATGATGGAAG ATGAAAAGAA TGGCCTAGTT GTTCATGAAG TCAACAATAC AGTAGAATTC
AAAGGATTAG CAAGAGTTGC ACAACGAAAT ATACCAAAAG AGATGGTAGA ATTCGCTCTA
AACTACGTTA GGAAATAA
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| Protein sequence | MSKVCIVFDR LRAEEKMLQK EASELGHDTV MLDAKITQVN TDSKKEDFDL GDVVLERCVS
YFRGLHFTAS LEFMDIPVLN KFDVASICGN KMFMTLLLKK AGVPTPKTYF SFTSESAAEN
LEKAGYPLVI KPVIGSWGRG VMPIKDRDTF DAISEIRDIT DSPHDRIYYL QELVERPPRD
IRVITVGDEP VAAMYRKSSG GFKTNIALGA DPELCEITKE MEDMAAKASK AMGGGILGID
MMEDEKNGLV VHEVNNTVEF KGLARVAQRN IPKEMVEFAL NYVRK
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