| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1286 |
|---|
| Symbol | |
|---|
| ID | 5773221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | + |
|---|
| Start bp | 1178045 |
|---|
| End bp | 1179244 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641316930 |
|---|
| Product | argininosuccinate synthase |
|---|
| Protein accession | YP_001582620 |
|---|
| Protein GI | 161528794 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0228509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA AAGGAATTCT TGCATTCTCT GGAGGACTAG ATACTTCAGT TGTTGTAAAG
TATCTACAAG ACGAACATGA CATGGATGTC ATCACAGTTA CAGTAGATGT TGGACAAGGT
GATGACAATA AAAAAATTGC AGCAAAAGCA AAAAAGCTTG GAGTAAAAAA ACACTATAAC
ATTGATGCAA GAAAAGAGTT TGTCAAAGAT TACATTTTTC CATCAATTAA AGCAAATGCA
CTTTATCAAA AGAAATATTG TCTTGCAACA GCACTTGCAA GACCACTAAT TGCTGAAAAA
GTTTTAGAGA TTGCAAAAAA AGAAAAAGTT ACATCTTTAG CTCATGGTTG TTCAGGAAAA
GGAAACGACC AAGTACGTTT TGACATTACA CTACGTTCTG GTTCTAACTT ACCAATCATT
GCACCAATTC GTGACAAAAA CTTGGACAGA GTTACAGAAT TAAAGTTTGC AAAGAAACAC
GGAATAGAGA TTGATACTGT AGCAAAAAAG TTTAGTATTG ATCAAAACTT GTGGGGCCGT
GCAATCGAAG GCGGTGTACT AGAAGATCCA TACAACGAAC CACCTGATGA TGCATTCATT
TGGGTAAAGA CAAAAAATTT GCCAGATAAA CCAACATACT TGGAGATCAA ATTCGAAAAA
GGAATTCCTG TTGGGGTTGA TGGAAAAACA ATGGATGGTC AAAAACTAAT AGAGTACATC
AACAAAAAGG CAGGAGATGC AGGAGTTGGA ATTGTTGATC ATATTGAAGA CAGGGTTGTC
GGAATAAAGT CGAGAGAGGT CTATGAGACA CCAGCTGCTA CTTGTTTGAT TGAAGCCCAT
TCAGACTTGG AAAAGATGGT CCACACAAAA CACGAAAACA AGTTCAAATC AATAATTGAT
GATGAGTGGG CATACCTAGC ATATTCAGGA TTGTGGCAAG ACCCACTAAA GTCAGATTTA
GACGGATTTA TCGAGGCATC CCAAAAGCCA GTTACAGGAA CAGTCAAGCT AAAGTTGTAC
AAAGGAAGTC TAAGAGTGGT TGGAAGAAAG TCCAAGAACT CACTTTACAG CCATGAGATT
GCCACATATG GTACAGAATC CACATTTGAC CAAAGATTGG CCAAAGGATT TGTAGAATTG
TGGGGAATGC AATCAACAGA AGCTAATAAA TTACAAAAGA AAAGGTCAAC AAAAATATGA
|
|---|
| Protein sequence | MTQKGILAFS GGLDTSVVVK YLQDEHDMDV ITVTVDVGQG DDNKKIAAKA KKLGVKKHYN
IDARKEFVKD YIFPSIKANA LYQKKYCLAT ALARPLIAEK VLEIAKKEKV TSLAHGCSGK
GNDQVRFDIT LRSGSNLPII APIRDKNLDR VTELKFAKKH GIEIDTVAKK FSIDQNLWGR
AIEGGVLEDP YNEPPDDAFI WVKTKNLPDK PTYLEIKFEK GIPVGVDGKT MDGQKLIEYI
NKKAGDAGVG IVDHIEDRVV GIKSREVYET PAATCLIEAH SDLEKMVHTK HENKFKSIID
DEWAYLAYSG LWQDPLKSDL DGFIEASQKP VTGTVKLKLY KGSLRVVGRK SKNSLYSHEI
ATYGTESTFD QRLAKGFVEL WGMQSTEANK LQKKRSTKI
|
|---|
| |