| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1285 |
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| Symbol | |
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| ID | 5774054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1176884 |
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| End bp | 1177909 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641316929 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001582619 |
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| Protein GI | 161528793 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0376066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC GTTCGGTAAT TGCTGCAGGA ATTGGGGCAA TTATCGTATT TTCTGCACTT
GGAATTGCTC TTAGCTCTAG TGATACTACC TATGAAAATA AAATTCGGAT TGCTTACTTT
CCAAACATTG GCCATGCCAT TCCAATTGTA GGGATGGAAA AAGGATTCTT TGCAGAGCAT
CTTGGTGATG ATGTAAAGAT TGAAACCAAA GTTTTTGATA GCGGACCTCA AGCAATAGAA
TCTCTATTTG CAAACTCTAT TGACATTGCA TATGTCGGTC CTGGACCTGC AATTAATGGA
TTTTTGAATT CTAATAATCA AAATGTAAAA ATTCTTGCTG GCGCTGCAAG CGGTGGTGCA
AGTTTCATTG TACATCCTGA TTCTGAAATA AACACTGCAG ATGACTTTGC AGGAAAAAAG
ATTGCTGCCC CTCAAATTGG AAACACACAA GATGTTTCAC TGCGTCATTT TTTGGCTGAA
AACCAACTAA AGCCAGCTGA GAAAGGTGGA AACGTTGTTG TATATAATAT TCCAAACCCT
GACATCTATA CTTTGTTTGT AAAAGGTGAC ATTGATGGTG CATGGGTTGC AGAACCTTGG
GCAACAATTT TAGAAACCGA ACTTGATGGA AAAAGATTAT TCCATGAAGA AGAACTTTGG
CCTGACAAAG AGTTTGCATC TGTTCTCTTA ATTGGAAATG TAGATTACAT TGATAAAAAC
AGTGTAGTAT GGGCTGACTA TATTCGTGCA CATCATGAAA CGCAAATTTG GATTGAATCA
AATCCTATAG AAACTAGAAA TGTTTTCAAT GACTTTCTTG ATTCTTACTT GGGACAATCA
CTTTCTGATG ATGTTGTAGA TGTTGCACTA TCCAACATTA TGATAACTGC AGATCCAAAA
CCAAACTCTG TGGTCTCATT TGCTGAAAAA GCAGATACTT TGGGATATCT TGGAAGAAAT
GGATATGATT TGTCTGGAAT TTTTTACAGC TTTGATACAA ATTCTCTAGA GGAGGCCAGC
ACGTAA
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| Protein sequence | MKIRSVIAAG IGAIIVFSAL GIALSSSDTT YENKIRIAYF PNIGHAIPIV GMEKGFFAEH
LGDDVKIETK VFDSGPQAIE SLFANSIDIA YVGPGPAING FLNSNNQNVK ILAGAASGGA
SFIVHPDSEI NTADDFAGKK IAAPQIGNTQ DVSLRHFLAE NQLKPAEKGG NVVVYNIPNP
DIYTLFVKGD IDGAWVAEPW ATILETELDG KRLFHEEELW PDKEFASVLL IGNVDYIDKN
SVVWADYIRA HHETQIWIES NPIETRNVFN DFLDSYLGQS LSDDVVDVAL SNIMITADPK
PNSVVSFAEK ADTLGYLGRN GYDLSGIFYS FDTNSLEEAS T
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