Gene Nmar_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1284 
Symbol 
ID5773428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1176120 
End bp1176884 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content40% 
IMG OID641316928 
ProductABC transporter-like protein 
Protein accessionYP_001582618 
Protein GI161528792 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0530246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TAGAGGCCAA AAATATTGTA AAGTACTTTA GCCATGATTC TCACAAGCTC 
AAGGCTCTAG GTGGAGTAGA CCTCAAAGTA GAGTCTGGTG ACTTTGTATG TTTGATTGGG
CCCTCTGGAT GTGGAAAGTC GACATTTTTG CGCATAGTTG CAGGCTTGGA AAAGCCTGAT
GAGGGTCAAA TTCTCTTTGA TGGCCGTCCT GTAAGTGAGA CTGGACCTGA AAGAATCATG
GTCTTCCAAG AAGGTGCATT GTTTCCGTGG CTTACAGTCC AAGACAACGT AGAGTTTGGA
CTAAAGATGG CCGGAATTCC AAAAGAAGAA CGTGCAAAGA TATCTCACAG ATATCTTGAC
ATGATGCAAT TAACAAAATT CACTGATTCG TACACTTACC AACTTTCAAC AGGAATGAAA
CAACGTGTAG CAATAGCAAG AGCTCTTGTG ATGGATCCTG ACGTATTACT AATGGATGAA
CCATTTGCAG CACTTGATGC ACAAACTCGT GATTTGTTGT TAGTTGAGAT GCAGTTGATC
TGGGAGAAAA CAAAAAAGAC TATTCTGTTT GTAACTCATA GTGTTGCAGA AGCTGCAGTA
CTTGGAACCA AAGTTGCTGT TTTTAGTAAC CGTCCATCAA CAATCAAAAA AGAAGTTGAA
AATGATTTTC CTAGACCAAG AGTTTCTGAA GATGAATCAT TATTAAAATT CCAACAAGAC
TTGCTATCTG AACTAAGACC TGAGGTAAAG AAAAACAAAC AGTGA
 
Protein sequence
MTKLEAKNIV KYFSHDSHKL KALGGVDLKV ESGDFVCLIG PSGCGKSTFL RIVAGLEKPD 
EGQILFDGRP VSETGPERIM VFQEGALFPW LTVQDNVEFG LKMAGIPKEE RAKISHRYLD
MMQLTKFTDS YTYQLSTGMK QRVAIARALV MDPDVLLMDE PFAALDAQTR DLLLVEMQLI
WEKTKKTILF VTHSVAEAAV LGTKVAVFSN RPSTIKKEVE NDFPRPRVSE DESLLKFQQD
LLSELRPEVK KNKQ