Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1284 |
Symbol | |
ID | 5773428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1176120 |
End bp | 1176884 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641316928 |
Product | ABC transporter-like protein |
Protein accession | YP_001582618 |
Protein GI | 161528792 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0530246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAAC TAGAGGCCAA AAATATTGTA AAGTACTTTA GCCATGATTC TCACAAGCTC AAGGCTCTAG GTGGAGTAGA CCTCAAAGTA GAGTCTGGTG ACTTTGTATG TTTGATTGGG CCCTCTGGAT GTGGAAAGTC GACATTTTTG CGCATAGTTG CAGGCTTGGA AAAGCCTGAT GAGGGTCAAA TTCTCTTTGA TGGCCGTCCT GTAAGTGAGA CTGGACCTGA AAGAATCATG GTCTTCCAAG AAGGTGCATT GTTTCCGTGG CTTACAGTCC AAGACAACGT AGAGTTTGGA CTAAAGATGG CCGGAATTCC AAAAGAAGAA CGTGCAAAGA TATCTCACAG ATATCTTGAC ATGATGCAAT TAACAAAATT CACTGATTCG TACACTTACC AACTTTCAAC AGGAATGAAA CAACGTGTAG CAATAGCAAG AGCTCTTGTG ATGGATCCTG ACGTATTACT AATGGATGAA CCATTTGCAG CACTTGATGC ACAAACTCGT GATTTGTTGT TAGTTGAGAT GCAGTTGATC TGGGAGAAAA CAAAAAAGAC TATTCTGTTT GTAACTCATA GTGTTGCAGA AGCTGCAGTA CTTGGAACCA AAGTTGCTGT TTTTAGTAAC CGTCCATCAA CAATCAAAAA AGAAGTTGAA AATGATTTTC CTAGACCAAG AGTTTCTGAA GATGAATCAT TATTAAAATT CCAACAAGAC TTGCTATCTG AACTAAGACC TGAGGTAAAG AAAAACAAAC AGTGA
|
Protein sequence | MTKLEAKNIV KYFSHDSHKL KALGGVDLKV ESGDFVCLIG PSGCGKSTFL RIVAGLEKPD EGQILFDGRP VSETGPERIM VFQEGALFPW LTVQDNVEFG LKMAGIPKEE RAKISHRYLD MMQLTKFTDS YTYQLSTGMK QRVAIARALV MDPDVLLMDE PFAALDAQTR DLLLVEMQLI WEKTKKTILF VTHSVAEAAV LGTKVAVFSN RPSTIKKEVE NDFPRPRVSE DESLLKFQQD LLSELRPEVK KNKQ
|
| |