| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1281 |
|---|
| Symbol | |
|---|
| ID | 5774473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosopumilus maritimus SCM1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010085 |
|---|
| Strand | - |
|---|
| Start bp | 1174343 |
|---|
| End bp | 1174807 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 641316925 |
|---|
| Product | ArsR family transcriptional regulator |
|---|
| Protein accession | YP_001582615 |
|---|
| Protein GI | 161528789 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3398] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0435937 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGATA GAGAATCTAT GCTAACTGAA ATAATTCATA AAAACCCTGG ATTACACTAT
AGTGAGATAA TTCGAGTATC TGGATTAAAG AACGGTGTTC TTTCTTACTA TTTGACTAAA
CTAGAATCAA ATGGAACAAT CAAAATTGAA CGTGAAAAAA ACAAAACTAG ATTTTTTACG
CCTACAATCA CGCATGAGGA AATCCGGATT ATTGTTTTTT TAAGAAAAGA AACATCACGA
CGTATTTTGT CTGTACTAAG TGATTCAGAT GGTCTCAAAT TCAAAAGAAT TGTAGAAAAG
GTGGGAAAAT CTGCACCAAC TATTTCTCAG AATTTATCTA AACTAATAGC GTCTGATTTA
GTGGTTTTGA AACTTGAAAA TTCTGAAAAA AAATATTATC TTAAAAGAAA TTCTACGCTG
AAAAAATTAA TTAAAAAATG TCAAATCAAT AATTCTTACA AATAA
|
|---|
| Protein sequence | MSDRESMLTE IIHKNPGLHY SEIIRVSGLK NGVLSYYLTK LESNGTIKIE REKNKTRFFT
PTITHEEIRI IVFLRKETSR RILSVLSDSD GLKFKRIVEK VGKSAPTISQ NLSKLIASDL
VVLKLENSEK KYYLKRNSTL KKLIKKCQIN NSYK
|
|---|
| |