Gene Nmar_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1277 
Symbol 
ID5773240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1171587 
End bp1172039 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content40% 
IMG OID641316921 
Producthypothetical protein 
Protein accessionYP_001582611 
Protein GI161528785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.112108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAT ATCTAAAATA TTCACTGTCT ATTCCAGTGT TTGCAGCAGT ATTTCTGCTT 
GCAGTAACTG CATTGCCAGC ACAAGAACAA CCTGCTGATG CATATGCAAG AACAGTAATG
GTCCACATTA CATCTGATGA GAATCACAGG GTATTGATGG GGGTTCAACA TGCAAAGGCA
ATGCTAGATA GTGGAAAAAA TGTTGCAGTT CTACTTGATG TAGATGGCGT AAAAGCAGGG
GTTAATCAAC CAGACTCAAA TCTATCTGCA TCCAATGATC TTCTACAGCA ATTTCTTGCA
GACGGTGGAA GAGTAATTGC ATGTCAGCAC TGTGTTGGCA TGGCAGGTTT CAGTATGAGT
GATATGCTCC CAGGAGTTGA AATTGATTCA CATCCAAACA TGCCTAAAAT GCAGAGATTG
ATTGATTCAG GTGCAGTAAT CTTAGATTAC TAA
 
Protein sequence
MKGYLKYSLS IPVFAAVFLL AVTALPAQEQ PADAYARTVM VHITSDENHR VLMGVQHAKA 
MLDSGKNVAV LLDVDGVKAG VNQPDSNLSA SNDLLQQFLA DGGRVIACQH CVGMAGFSMS
DMLPGVEIDS HPNMPKMQRL IDSGAVILDY