| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1273 |
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| Symbol | |
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| ID | 5774330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1168392 |
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| End bp | 1169255 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641316917 |
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| Product | blue (type1) copper domain-containing protein |
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| Protein accession | YP_001582607 |
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| Protein GI | 161528781 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3794] Plastocyanin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.367942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA AAACAGTTCT ATTGGCAATC ATGACTGTGG TTATTAGTAC TGGAAGCATC
AATGCTTTTG CAGATCATCC TCAAACTGAG ATCTCTGTTG CTCCTGGCGC TAACCTCCCT
GGTTGTGAAA CTGCTGATGA ATGTCTTGTT TCTTCTGAGG TTACAGTTAA TGTTGGAGGA
GAAGTGATTT GGACAAACAA TGCTGAATCA AATACTACAA TTTCAAGTGG AAATCCTGAT
GATGGACCTG ATGGTATGTT TGATTCTGGA TTACTTGGTC CTGGAGAAAG CTTTACCCAT
ACATTTGATG AACCTGGAGA ATACTCTTAC TTTTCAATGA TTCATCCTTG GATTCAAGGT
GTAGTTATTG TACAAGAATC AGGAGATCAT GACGAACACA GTGACGAGCA CGGTGATGAA
CACAGTGACG AAATGATGAT GCCAGAAGGT GATGCAACTG CAATGGGTAT GCTATCTGAT
GGTACAATGG TTTCAATTTG GACTTCAGTC CCAACTGCAG GTGAAGCAAT GGAAATTTCT
ATTGAGTTCA AAGATGCAGA ACATGTTAAT CATGACATAA TGGTTACACA AAACGGTGAT
GAAGTTTTGC ACGATGAAGG TGCACATCAT CATGAAGGCA CTGGCATGCA TATGACTGCA
CCCCTAAGTT CTGCTGACCC AGTAGACATT ACTATCACCT TCCAAGGTTA TGGTATTGAC
GAAAAGACAG GACCAATTGG TGAAGAAGTA GTATTCACAA ACGTTGTTCC AGAATTTGGT
ACAATTGCAA TGATGATACT AGCTGTTGCA ATCATAAGCA TCGTAGCAGT CACTGCAAAA
TCTAGAGTAG TTCCAAGATT TTAG
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| Protein sequence | MKSKTVLLAI MTVVISTGSI NAFADHPQTE ISVAPGANLP GCETADECLV SSEVTVNVGG
EVIWTNNAES NTTISSGNPD DGPDGMFDSG LLGPGESFTH TFDEPGEYSY FSMIHPWIQG
VVIVQESGDH DEHSDEHGDE HSDEMMMPEG DATAMGMLSD GTMVSIWTSV PTAGEAMEIS
IEFKDAEHVN HDIMVTQNGD EVLHDEGAHH HEGTGMHMTA PLSSADPVDI TITFQGYGID
EKTGPIGEEV VFTNVVPEFG TIAMMILAVA IISIVAVTAK SRVVPRF
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