| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1267 |
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| Symbol | |
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| ID | 5774573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1161915 |
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| End bp | 1164413 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316911 |
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| Product | methionine synthase |
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| Protein accession | YP_001582601 |
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| Protein GI | 161528775 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTACAC CTAGAGTAAG TTCTGCATTA AAGGCAGTTG ATCTAAAACA AATTCCTGCC
CCGCTAATCA TTGGAGAGAG AATCAATACA CAAGGTTCTC GTAAGGCAAA ACAACTGGTT
CTTGCAGATG ATTATGACGG TCTAGTTGAT TTAGGTAGAA CTCAAGTTGA GGATGGAGCA
CATTGTCTTG ATGTATGTGT TGCAACAACT GAACGTGCTG ATGAAAAAGA TTTCATGCTA
AATCTAGTAA AGCGTTTGAG CTTGGAAGTT GATGCACCAT TAGTAATTGA TTCAACTGAT
CCAGATGTAA TTGATGCATC TGTAAAACAG ATTCCAGGAA GACCAATAAT CAATTCTATT
AATCTTGAAG GTGATGGAAG TAGATTTGAA AAACTTGCAC CAATTATGGC AAAGTATGGT
TTACCTGCAA TAGCATTATG CATTGGACCA AACGGAATGG CAAAGACTCC TCAACAAAAA
CTAGAGACAG CTGAATTACT TTTTGAAACT GGTAAAAAAT ATGGATTAAA AATTGAACAA
TTTATCTTTG ATGTTCTTAC ATTTACACTT GCAACTGGCG AGGACGAATT TCTTGAAGCA
GGAAAAAATA CTCTTGAAGG AATTCGACTA GTCAAAGAAA AATACCCTGA ATCTTTTACT
ACCTTGGGTC TAAGTAACAT TAGTTTTGGA CTGGTTCCTT ATGCTAGAAA AATTCTAAAC
TCTGTATTTC TACATCATGC AATAAAGTCA GGTCTTGATA CTGCAATTGT TAATGCAAAA
GAGATAATTC CTTATGGAGA GATTGATGAG AAGGAAAGAA AACTTGCCGA AGATCTAATC
TTTAACACTC ATCCTAATGC CTTATCTGAA CTAATCACAT ACTTTGAGAA TGCAGGACCT
CAAACTAGTA CTGCATCAAA GAAAGTTGAT GTAGACCCAT CTTGGCCTGC AGGAAAGAAG
GCCAACTTTA GAATCGTAAA CAGACTCAAG GATGGAATAG AAAATGATGT TGTATCTGCA
ATTGCTGATA AAGTTGGAAA AAATGAAATT CTAAAGGATA CTGATGGTGT TCTTTCACTT
GATGCTCCTC CTGAAGAAAC TCATGATGGT GCAATTAGAA CTCTCAATGA AGACTTGTTA
CCTGCAATGA AAGAAGTAGG TGATAAATTT GGAGCAGGAG AATTAATCCT TCCATTTGTT
TTGAAATCTG CTGAATGTAT GAAAGCAGCT GTTGGTGAAC TTGAAAAGTA TTTGGTCAAA
GAAGAAGGCT CTAGCAAAGG AAAACTGGTT TTAGGAACTG TATATGGTGA TGTTCATGAT
ATTGGGAAGA ATTTGGTAAA GACTATCTTT CAAAATAATG GTTATACTGT TTATGATCTT
GGAAAACAAG TTCCACTGCA AAAATTCCTT GAGAAAATTG ATGAAGTAAA TCCTGATGCA
ATTGGGCTTT CTGCATTACT AGTTTCTACT TCAAAACAAA TGCAATTCTT TGTAGAACAT
GCAAGAAAAA ACAAGATGAA TATTCCAATT CTATGTGGTG GTGCTGCAAT TAACAGCAAT
TACATTAATC GTATTGCAAA AGAAGATGGA ATCTATGAGC CTGGTGTCTT TTATTGTAAT
ACAATGTTTG AAGGTCTAAA AACAATGGAC ACATTGATCT CTGATGAAAA ACCAAAATTG
TTAGCAGAAT GGAAAGAAAA ATTAGAAAAC TGGAAAGAAA AATCTACTGC AACTGTTGAT
CCTGCCAGTC TACCAAAAAG TGACATCAAA CCTGTACAAG CACCTACTCC AACAACTATT
GGTGAACCTA TTCGTCTCAA AGGAGAACAA ATCAAGATGG ATGAAGTATG GCAACTAATT
GACAAGAAAT CCCTCTTCAA GCTTTCATGG GGACTAAGAG GTAAAGCAGG CTCTGAATCA
GAGGCTGATC ACGAACAACT GCTTAGTCAA TGGAAGATTA GAATAATTCG AGAAAAACTG
TTTGAACCCG AAGTAGTTTA TGGCTATTTC AAATGTCACA ACAAGGATGG AAAACTATCT
GTAGAAAATC CTCGTGGCGA TGATGTATCC TTTGATTTTC CTCGTTCTAC TAAACCTGAA
CATCTATGTT TAACTGATTA TTTTGGTGAT GATGATGTTG TTGCATTTCA AGCTGTAACA
GTTGGTAACA AAGTTGCAGA TATTATCGAA CAATGGAATA AAGAGGACAA GTACACTGAT
GCATACTATC TTCATGGATT GGCAGTTGAA GTTGCAGAAG CATTAGCTGA ATGGATTAAT
CGCAAAATAA AATCTGAATT GAATTTAGAT GCAGGTGGTT TGAGATATTC TTGGGGTTTC
CCTAGCTGTC CTGATGTATT GCAACATCAA TTGGTATGGA AACTCTTGGA ACCACAAAAA
TCTGGAATGG AATTAACTGA ATCAGGTCAA ATAATTCCTG AGCAATCAAC TGCTGCTATA
GTTGTACATC ATCCTAAAGC ACAGTACTTT GTACTTTAG
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| Protein sequence | MTTPRVSSAL KAVDLKQIPA PLIIGERINT QGSRKAKQLV LADDYDGLVD LGRTQVEDGA
HCLDVCVATT ERADEKDFML NLVKRLSLEV DAPLVIDSTD PDVIDASVKQ IPGRPIINSI
NLEGDGSRFE KLAPIMAKYG LPAIALCIGP NGMAKTPQQK LETAELLFET GKKYGLKIEQ
FIFDVLTFTL ATGEDEFLEA GKNTLEGIRL VKEKYPESFT TLGLSNISFG LVPYARKILN
SVFLHHAIKS GLDTAIVNAK EIIPYGEIDE KERKLAEDLI FNTHPNALSE LITYFENAGP
QTSTASKKVD VDPSWPAGKK ANFRIVNRLK DGIENDVVSA IADKVGKNEI LKDTDGVLSL
DAPPEETHDG AIRTLNEDLL PAMKEVGDKF GAGELILPFV LKSAECMKAA VGELEKYLVK
EEGSSKGKLV LGTVYGDVHD IGKNLVKTIF QNNGYTVYDL GKQVPLQKFL EKIDEVNPDA
IGLSALLVST SKQMQFFVEH ARKNKMNIPI LCGGAAINSN YINRIAKEDG IYEPGVFYCN
TMFEGLKTMD TLISDEKPKL LAEWKEKLEN WKEKSTATVD PASLPKSDIK PVQAPTPTTI
GEPIRLKGEQ IKMDEVWQLI DKKSLFKLSW GLRGKAGSES EADHEQLLSQ WKIRIIREKL
FEPEVVYGYF KCHNKDGKLS VENPRGDDVS FDFPRSTKPE HLCLTDYFGD DDVVAFQAVT
VGNKVADIIE QWNKEDKYTD AYYLHGLAVE VAEALAEWIN RKIKSELNLD AGGLRYSWGF
PSCPDVLQHQ LVWKLLEPQK SGMELTESGQ IIPEQSTAAI VVHHPKAQYF VL
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