Gene Nmar_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1263 
Symbol 
ID5772976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1159800 
End bp1160363 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content36% 
IMG OID641316907 
Product50S ribosomal protein L31e 
Protein accessionYP_001582597 
Protein GI161528771 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2097] Ribosomal protein L31E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAG AATTAGAACG CGTTTACACA ATTCCACTTG GTAAAGTATT ACTCTCTCAG 
TCACAACACA GAGCAGTTAG AGCAATCAAT ATGATCAAAG AATTTGCTCG TCATCACATG
AAAGTTGAAG ATATTAAAAT TGAAGAAGAT TTAGCTCACC AAATTTGGGC AAAAGGAATT
CGAAGTCCTC CAAGAAAGAT TAGAGTTAGA ATGAGCAAGA CCGATGAAGG CTATGTTCTT
GTTTCTCCAT ATGAAGAAGA AATTGAATCT AAAGTAACAC CTGAAAAAGA AACTCCAAAA
GTTGAAGACA AAGTAGAAGA GCCAACTAAG GAAGAAACTA AAGTTGAAGC AGAAGTAGAA
GAACCAGAAG CAGAAACTAA AGTCGAGGCT GAAGTAGAAG AACCAACTAA AGAAGAGGCA
CCAGCAAAAG AAGAGAAACC ATCTAAAGAA GAACCAAAGA AAGAAGAGGC ACCAGCAAAA
GAAGAACCTA AAGTTGAAGA CAAAGTAGAA GAACCAACTA AAGAAGCACC TTCTGAAAAA
CCAAAGAAAG CAGAAAAAGA ATAA
 
Protein sequence
MSQELERVYT IPLGKVLLSQ SQHRAVRAIN MIKEFARHHM KVEDIKIEED LAHQIWAKGI 
RSPPRKIRVR MSKTDEGYVL VSPYEEEIES KVTPEKETPK VEDKVEEPTK EETKVEAEVE
EPEAETKVEA EVEEPTKEEA PAKEEKPSKE EPKKEEAPAK EEPKVEDKVE EPTKEAPSEK
PKKAEKE