| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1261 |
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| Symbol | |
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| ID | 5773162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1157471 |
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| End bp | 1158739 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641316905 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001582595 |
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| Protein GI | 161528769 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA TATTTGTAGA ATCTTATGGA TGTTCTGCAA GCTTTGCAGA CTCTGAAATG
ATTTCAGGAT TAATTCTAAA CGGAGGACAT ACTTTGGTAG AAGATTCTTC AGAATCAGAT
CTCAATGTTG TGGTAACATG TTCTGTAAAG GATGCGACTG CAAACAAGAT GGTTCACAGA
ATAAAGTCAC TAAAGACAAA GCCTCTAGTT GTGGCAGGAT GTCTACCAAA GGCAGAAAAA
GAAACTGTAG AAAAGTTTTC TGAAAATGCA AGTCTACTTG GTCCAAATTC TTTAGGAAAG
ACTCTCCAAG TTATTGATTC CACACTCAAA GGAAGGAAAA AGATTGCATT AGAAGACACT
GATCTCTCAA AAGTTGGGCT GCCCAAAGTC AGATTGAATC CAGCAGTAGG AATAGTTGAA
ATTGCAAGTG GATGTATGAG TGAATGTACA TTTTGTCAAA CTAAGATTTC AAAAGGCGAT
CTTCAAAGCT ACAGACTAGG AGACATTGTA AGACAAGTAA AGACAGAGAT CAATGAAGGA
TGTAAAGAAG TCTGGTTAAC ATCAACAGAC AATGGATGTT ATGGATTTGA CATTGGAACA
GATTTACCTT CTTTGATTAA TGCAGTGTCA GAAATTCCTG AAGAGTTTAT GATTAGAGTT
GGAATGATGA ATCCAATGTA CATGCCACGA ATCAAAGAAA AGTTAATTGA ATCATATGAT
AATGACAAAG TCTTCAAGTT CCTACACATT CCAGTACAAA GTGGAAGTGA CAAAGTTCTA
CATGACATGA AAAGAGGACA TACTGCTGGA ACCTTTAGGG AGATTGTAAA GAAAGCAAGA
GAGAGATTCC CAGACTTTAC CATTTCAACT GACATCATAG TTGGATTCCC ATCAGAGACC
AAAGAAGACT TTGAGAAAAC AGTAGAACTG CTTGATGAGA CAAGACCAGA TGTTGTAAAT
CTCTCAAAAT ATAGCGCTAG GCCTGGAACA GAAGCTGCTG AATGGGAGCA AATTGATGTT
GCAGAAGTAA AATCAAGAAG TAAGAGAATT TTTGAGCAGA TCAACAAAAT ATCATTGGAG
AACAACAAAA AGTGGATCGG TTGGAAAGGT GACGTTCTCT TTGATGAGCA GACAGATGAG
GGAATCAAAG GTAGAAACTT TGCTTACAAG CCAGTCTTTG TCCCTGAACA AGTAGACATT
GGTCAATTAC ATGCAGTTGA GATCATTGAT GCTACTCAAA ATAGCCTTCT TGGAAAGATC
GCAAGCTAA
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| Protein sequence | MAKIFVESYG CSASFADSEM ISGLILNGGH TLVEDSSESD LNVVVTCSVK DATANKMVHR
IKSLKTKPLV VAGCLPKAEK ETVEKFSENA SLLGPNSLGK TLQVIDSTLK GRKKIALEDT
DLSKVGLPKV RLNPAVGIVE IASGCMSECT FCQTKISKGD LQSYRLGDIV RQVKTEINEG
CKEVWLTSTD NGCYGFDIGT DLPSLINAVS EIPEEFMIRV GMMNPMYMPR IKEKLIESYD
NDKVFKFLHI PVQSGSDKVL HDMKRGHTAG TFREIVKKAR ERFPDFTIST DIIVGFPSET
KEDFEKTVEL LDETRPDVVN LSKYSARPGT EAAEWEQIDV AEVKSRSKRI FEQINKISLE
NNKKWIGWKG DVLFDEQTDE GIKGRNFAYK PVFVPEQVDI GQLHAVEIID ATQNSLLGKI
AS
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