Gene Nmar_1252 details

Gene Information

• Locus tag: Nmar_1252
• ID: 5773266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosopumilus maritimus SCM1
• Kingdom: Archaea
• Replicon accession: NC_010085
• Strand: +
• Start bp: 1149023
• End bp: 1149688
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641316896
• Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
• Protein accession: YP_001582586
• Protein GI: 161528760

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGCAG TAATTGGTGA AAAGGTACCA AATTTTGGAG TCTCAGATTG GGTCCAAGGT 
GCACCAACAA ACTTTGACCA AGAAAAAGAC CATATAGTTC TAGTAGAGGT ATTCCAAGTA 
AACTGCCCAG GTTGTTTTAT GCATGCCTTG CCTGAAGCAA TTGAAATTTA CAACAAATAC 
AAAGATGATG GTGTAAGAGT AATTGGAATT GCTACTGCTT TTGAAGATTT TGATAAAAAT 
ACATTAGATA ATTTGAAGAT GTTAGCTGAG ACAGGAGAAA TAGTTGGAGA AACAAAAAGT 
GCATTCCAAA TGAGCGGACA ACTACAAGAA GGAGACAAGT TACCATACAA AATTCCATTT 
CCTTTAGCAA TGGATAACCT GGTAAAGACA ACAGGTGAAA TAAGCCAAGA AAAAATTATG 
GAGTTTATCT ATCCACAAAT TCCAGAATTT GATTCACAAC CAGAAGATTA TAGAAATCAA 
ATCATACAAA GAGTCAAAGA CTATATGAAA TCAAAAGAAT ACTCTGCTGA AACATTTGAA 
AAGTTTGCAC TACGTGGAAC CCCATCAACT ATTCTAGTAG ATAGAAAAGG AGTTCTAAGA 
GATGTTTCAT TTGGTCAAGT TGGACAAGCA GAAGCAATGA TTCAAAAATT ACTTAGTGAA 
GATTAG 

 

Protein sequence

MSAVIGEKVP NFGVSDWVQG APTNFDQEKD HIVLVEVFQV NCPGCFMHAL PEAIEIYNKY 
KDDGVRVIGI ATAFEDFDKN TLDNLKMLAE TGEIVGETKS AFQMSGQLQE GDKLPYKIPF 
PLAMDNLVKT TGEISQEKIM EFIYPQIPEF DSQPEDYRNQ IIQRVKDYMK SKEYSAETFE 
KFALRGTPST ILVDRKGVLR DVSFGQVGQA EAMIQKLLSE D