Gene Nmar_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1243 
Symbol 
ID5773225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1138810 
End bp1140342 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content35% 
IMG OID641316887 
Producthypothetical protein 
Protein accessionYP_001582577 
Protein GI161528751 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTTAG GATTTGTAAT TGGTGAATCA AAACCAACAT TTGTCACTGC AATAACATCA 
AGAGCTTTGT CTGTTGGAGA ATACATCAAG ATTGGTTCTG ATGAAGGAGA GATATTAGGA
CTGGTTGAAA AATCATCAGT TACAAGTGCA GCATTTACAG ATGTTAGGAA TTTTGATGAA
GCAGCTGAAA GTACAGAGAT AGCAGAGTTA AACAAGAGAG ATAAGACGTT TACTGCACAT
ATTGGAATTT TGGGGTTTTT AGAAAATTTG AGAAAAGGTC AGTCAATTAT TCCTGCAATT
CCTCCCATTC CAGGCACGGA AATCACTCAA CCAAGCAAAC AAGACCTTGA GGAAATCTTT
AGTCCCAAAA ATGATGGATG GGTAAAGATT GGAAATCTTT TGAGAAACAA GACAATTGAT
GCTAAAGTGA ATTTGGATAA AATTGTCTCA AGACATTTAG GAATTTTAGC AATGACTGGT
ATGGGTAAAA GTAATCTTGT ATCACTAGTT ACAAAACAAA TTTCAAAATT AAAAGGGACT
GTAATAATTT TTGATTATCA CAATGACTAC ACAACATTAA ACATTCCAAG AATTAATGTG
GTTGACGCAA AAATTAATCC AAGATTACTT GACGCAGATC AACTTTCAGA AGTTCTAGAA
ATCAGGGACG GTGCAAATGT TCAACAAAGA GTACTAAGAA TGGCATTTAC AAAACATGTC
AAAGAATCAA AAGAATTTTG GAGTAAATTA GAAAATGAAA TTGATTTTAT TGTGAATTCA
GAAGATAAAA AACTAAAAGA GATTAGAACA TCAGCATATA GAGTTCAAGA TATAATAGAA
GAAGCTCAAA AAAGATTTGA AGATATTTTA GATCCTGATA TGGGAGATCC AATTAGTTTT
ATCAAAGAAG GTCGTACCAA TGTTCTCAAT ATTTCAGAAT TGTCTGAAAA ACAAGCAAAT
GTTGCAGTTG CATTTTACTT GCAACAACTA CTCAAAGACA GAAAAGATGC AAGTATTGCA
AGACACGGTA AAAGTAAGAG AGAAAGAAAC TATAGATTCA ATTCTCCTAT TTTTGTAATT
ATTGAAGAAG CACATGTTTT CATTCCAAAA GACCACGATA CTAGTGCAAA ATATTGGGCA
GCAAAGATTG CCAGAGAAGG AAGAAAGTTT GGATTGGGAT TAGGAGTTGT ATCTCAGAGA
CCTCGAAGTG TAGATCTTAA TGTTCTCAGT CAGATGGGCT CTTTTGCAAT AATGAAGATA
ATTCAAGAAG ATGATCAGCG CCAAATAGCC TCAGCAACAG AGTCAACTAG CCGTGAATTG
ATTGCTCAGT TGACCTCACT GAATGTGGGT GATGCAGTTC TAGTAGGACA ATGGACAAAT
TTGCCATCAC TAGTACATGT TGAAGAAGTA AAAGAAAAAA TCATGGGAGC AGACCAAAGT
GCAGTAAATG CTTGGGCCAA TGCAGAAAAG ATGAAAGAAG TTGCAGTAGA ATCAACACAA
GGACTCGTTC AAAAAGATTT GTTATTAGAC TGA
 
Protein sequence
MSLGFVIGES KPTFVTAITS RALSVGEYIK IGSDEGEILG LVEKSSVTSA AFTDVRNFDE 
AAESTEIAEL NKRDKTFTAH IGILGFLENL RKGQSIIPAI PPIPGTEITQ PSKQDLEEIF
SPKNDGWVKI GNLLRNKTID AKVNLDKIVS RHLGILAMTG MGKSNLVSLV TKQISKLKGT
VIIFDYHNDY TTLNIPRINV VDAKINPRLL DADQLSEVLE IRDGANVQQR VLRMAFTKHV
KESKEFWSKL ENEIDFIVNS EDKKLKEIRT SAYRVQDIIE EAQKRFEDIL DPDMGDPISF
IKEGRTNVLN ISELSEKQAN VAVAFYLQQL LKDRKDASIA RHGKSKRERN YRFNSPIFVI
IEEAHVFIPK DHDTSAKYWA AKIAREGRKF GLGLGVVSQR PRSVDLNVLS QMGSFAIMKI
IQEDDQRQIA SATESTSREL IAQLTSLNVG DAVLVGQWTN LPSLVHVEEV KEKIMGADQS
AVNAWANAEK MKEVAVESTQ GLVQKDLLLD