Gene Nmar_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1228 
Symbol 
ID5773806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1127657 
End bp1128040 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content35% 
IMG OID641316872 
Producthypothetical protein 
Protein accessionYP_001582562 
Protein GI161528736 
COG category[S] Function unknown 
COG ID[COG2164] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA AAATTCACAT TGATGTCGAA TCTTCAAAAA TAATCTTAAA GTTAGATGAC 
ACTTATTCTC CAAAAACTGT AAATGAATTT GTTGAAAAAT TACCCTTTAC AGTAGATCTT
AATGTTTGGG GTGATGAAAT CTATTCCTCA AAATCTCCCA TTACTCAGCC TGAAGAAAAT
GCAAAGTCTC CTGTAGAACT AAATGATGTT GCCTATTGGC CAACAGGAAA AGCTATTTGC
TTATTTTATG GTCCCACTCC AATTGGAAAT CCTGGAGAGA TAACTCCTGC ATCACCTGTG
AATGTAATTG GCAAAGTAGT GTCTCCTGAC AAATCAATTC TTAGTATGGT TGATGGAACA
AAGGCTACCT TTAGGAAGGC ATGA
 
Protein sequence
MKHKIHIDVE SSKIILKLDD TYSPKTVNEF VEKLPFTVDL NVWGDEIYSS KSPITQPEEN 
AKSPVELNDV AYWPTGKAIC LFYGPTPIGN PGEITPASPV NVIGKVVSPD KSILSMVDGT
KATFRKA