Gene Nmar_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1227 
Symbol 
ID5773116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1127264 
End bp1127656 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content31% 
IMG OID641316871 
ProductMov34/MPN/PAD-1 family protein 
Protein accessionYP_001582561 
Protein GI161528735 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGAAAA TTATCTTATC AAATTCAGAT AAAAAAATTC TAACACAACA TGCTGAAAAT 
GAAAAACCAA ATGAATCATG TGCAATACTG TTTGGGAAGG ATAATACAGT GTCAGAGGTA
TTTTTAACAA AAAATATCGA AGAATCACCA GTAAATTTTA CCATTTCAAA TGAGCAGTTA
ATTGAAGGAT ACAAGATTGC CGAAGAAAAA AAGATAGACG TGATAGGGAT TTTTCATTCA
CATCCAAATT CTGAGGCATA TCCATCAAAT ACAGATAAAA AATTCATGAA GAGCAACCCT
GTTGCATGGG TAATCTATTC TGGAGTAAAC AAAGATTTTA GAGCATATTT CTTAGAATCC
GAAATCAAAG AAATCCCAAT TGAAGAAAGA TAA
 
Protein sequence
MQKIILSNSD KKILTQHAEN EKPNESCAIL FGKDNTVSEV FLTKNIEESP VNFTISNEQL 
IEGYKIAEEK KIDVIGIFHS HPNSEAYPSN TDKKFMKSNP VAWVIYSGVN KDFRAYFLES
EIKEIPIEER