Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1227 |
Symbol | |
ID | 5773116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | + |
Start bp | 1127264 |
End bp | 1127656 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641316871 |
Product | Mov34/MPN/PAD-1 family protein |
Protein accession | YP_001582561 |
Protein GI | 161528735 |
COG category | [R] General function prediction only |
COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGAAAA TTATCTTATC AAATTCAGAT AAAAAAATTC TAACACAACA TGCTGAAAAT GAAAAACCAA ATGAATCATG TGCAATACTG TTTGGGAAGG ATAATACAGT GTCAGAGGTA TTTTTAACAA AAAATATCGA AGAATCACCA GTAAATTTTA CCATTTCAAA TGAGCAGTTA ATTGAAGGAT ACAAGATTGC CGAAGAAAAA AAGATAGACG TGATAGGGAT TTTTCATTCA CATCCAAATT CTGAGGCATA TCCATCAAAT ACAGATAAAA AATTCATGAA GAGCAACCCT GTTGCATGGG TAATCTATTC TGGAGTAAAC AAAGATTTTA GAGCATATTT CTTAGAATCC GAAATCAAAG AAATCCCAAT TGAAGAAAGA TAA
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Protein sequence | MQKIILSNSD KKILTQHAEN EKPNESCAIL FGKDNTVSEV FLTKNIEESP VNFTISNEQL IEGYKIAEEK KIDVIGIFHS HPNSEAYPSN TDKKFMKSNP VAWVIYSGVN KDFRAYFLES EIKEIPIEER
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