| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1223 |
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| Symbol | |
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| ID | 5773301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | + |
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| Start bp | 1122715 |
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| End bp | 1124880 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316867 |
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| Product | AAA family ATPase |
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| Protein accession | YP_001582557 |
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| Protein GI | 161528731 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCAAAG AAGAACCTTT GCAGATGCGA ATTGGAGAAG CAAAACAACG AGACGTAGGT
AAAAAACGAG CTCGAATTGG TCCTGAAGCA ATGGACTTTC TAAAAGTGAC TCCAGGAGAC
ATAGTTGAAG TTATGGGCTC AAGAACTAGT TGTGCAGTAA TTTGGCCAGT AGACGAAGAC
GAAAAGTTCC CAGACATCAT AAGAGTTGAC GGTCAAACAA GAAAAAACGT TGGTGCGTCA
CTAAATGACA TTGTGAAGAT TAGAAAAGTA ACATCAAAGA TTGCAAAATC TGTTTCTTTA
ACTCCAGTTA ATGATTCAGT CACAGTTGAT AAAGAATTCA CAGATTTTGT AAAAAATAGA
CTAAAAGGAT TGCCAATTAC ACATGGTGAT GAAATTTCAG TAATGATTCT AGGAAATTCA
ATGGACTTTA AAATTACAAA GACAACACCA AAAGGAGTAG TAAAGATTGA CCGTTCCACT
ACACTTAACA TTTCAACTGA AACTGCAGTA GATAGAAAAG TCAGAGTGAC ATATGAAGAA
GTTGGAGGTT TAGGAGAAAA AGTCAAAGCA ATGAGAGAGA TTGTAGAACT TCCACTAAGA
CATCCAGAGT TATTCTCCAG ATTAGGAATT GAACCACATA GTGGAATTTT ACTTTATGGA
CCACCAGGAT GTGGAAAGAC TTTGCTTGCA AAAGTTATGG CAAGTGAATC AGAAGCTAAC
ATGTTCCCAA TTAATGGTCC AGAAATAATG AACAAGTATT ATGGTGAAAC AGAAGCAAAG
TTAAGAGACA TTTTCAAAGA AGCAAAAGAC AATTCTCCAA GTATAATCTT TATTGACGAA
ATAGATGCTA TCGCACCAAA AAGAGAAGAG GCTTACGGAG ATGTTGAGAA AAGAGTTGTT
GCACAACTTT TGGCTTTAAT GGATGGTCTT AATGATAGAG GAAATGTAAT TGTTCTTGGA
GCTACAAATA GACCAGATAG TGTTGATCCT GCACTTAGAA GACCAGGTAG ATTCGACAGA
GAGTTTGAGA TTTCAGTTCC AAATGAGGAT GGAAGAATAG AGATTCTTCA AATTCATACA
AGAGGCATGC CAATTGATGA GGATATTGAT CTAAAAGACT TAGCATCAGA ATTACACGGA
TACACTGGTG CAGATATCAA ATCATTATGT AGAGAAGCTG CAATGAAATC AATTAGAAGA
TATCTACCAG AAATAGATCT TGAAACAGAA AAAATTCCTT CTGAAGTACT ACAATCAATG
AAGATCAAAC TAATCGACTT TTACGATGCA ATGCACGAGG TTGTACCTAC TGCAATGAGA
GAGGTCTATG TAGAACGACC CAAAGTTTGG TGGCAAGATG TAGGAGGATT AGATGAAATT
AAAAAATCAT TGACAGACAA TCTGATTTTA GCAATGAATG AACCAGGTAA ATTTACCAAA
ATGGGAATTA AACCTCCAAA GGGCGCATTA ATTTATGGAC CTCCAGGGTG TGGAAAAACT
TTGCTTGGAA GAGCACTAGC AACAGAAACA GGTGCAAATA TGATTTTAGT CAGAGGGCCC
GAAATTCTCT CAAAATGGGT AGGAGAGTCT GAAAAAGCTG TTAGAGAAAT TTTCAGAAAA
GCAAAAGCAT CATCTCCATG CGTAGTTATT TTTGATGAAT TGGATTCACT AGCACGTAGT
AAATCAGGTG AAGGAGGAGT TGGTGAAAAC ATTCTCAGTC AATTATTAAC AGAGATTGAA
GATGGAGTTT CTTCACGAGT GGTAGTAATA GGAATTACAA ACAGACCAGA TGTTGTAGAC
AATTCATTGC TTAGAACAGG AAGATTAGAT TTAGTCTTGT ATGTTGAACC TCCAGATGAA
AAAGGACGAT TAGAAATTAT CAAAATTTTG ACTAAGAAAA TGCCATTAAC CAGTGATGTG
AAATTGCAAG AAATTGCCGT AGCAACTCAA AACTATACAG GGGCAGATTT AGCTGCATTA
TGTAGAGAAG CAGCAGTACA AGCTATGCAA AATAATGCCA CAAAGATATC CAGTCAAGAC
TTTGCAAACA GTTTGAAACA TGTTAGACCT TCAATTACAA AAGAAGTGGA TCAATGGTAC
AAATCAGTTA AGGAAAGTAT ATCTAACGTG GTACCAAAAA CAGGAGATAA AACATTCTAC
GGATAA
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| Protein sequence | MRKEEPLQMR IGEAKQRDVG KKRARIGPEA MDFLKVTPGD IVEVMGSRTS CAVIWPVDED
EKFPDIIRVD GQTRKNVGAS LNDIVKIRKV TSKIAKSVSL TPVNDSVTVD KEFTDFVKNR
LKGLPITHGD EISVMILGNS MDFKITKTTP KGVVKIDRST TLNISTETAV DRKVRVTYEE
VGGLGEKVKA MREIVELPLR HPELFSRLGI EPHSGILLYG PPGCGKTLLA KVMASESEAN
MFPINGPEIM NKYYGETEAK LRDIFKEAKD NSPSIIFIDE IDAIAPKREE AYGDVEKRVV
AQLLALMDGL NDRGNVIVLG ATNRPDSVDP ALRRPGRFDR EFEISVPNED GRIEILQIHT
RGMPIDEDID LKDLASELHG YTGADIKSLC REAAMKSIRR YLPEIDLETE KIPSEVLQSM
KIKLIDFYDA MHEVVPTAMR EVYVERPKVW WQDVGGLDEI KKSLTDNLIL AMNEPGKFTK
MGIKPPKGAL IYGPPGCGKT LLGRALATET GANMILVRGP EILSKWVGES EKAVREIFRK
AKASSPCVVI FDELDSLARS KSGEGGVGEN ILSQLLTEIE DGVSSRVVVI GITNRPDVVD
NSLLRTGRLD LVLYVEPPDE KGRLEIIKIL TKKMPLTSDV KLQEIAVATQ NYTGADLAAL
CREAAVQAMQ NNATKISSQD FANSLKHVRP SITKEVDQWY KSVKESISNV VPKTGDKTFY
G
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