Gene Nmar_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1200 
Symbol 
ID5773268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1095261 
End bp1095635 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content39% 
IMG OID641316844 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_001582534 
Protein GI161528708 
COG category[S] Function unknown 
COG ID[COG1990] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00283] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTT TTGATAATAG TATGGGAGAT ATCAAACAGG TTATTGTTGT TAGAACTGAC 
CTTGAAATGG GTAAAGGAAA AATTGCTGCA CAAGTAGGAC ATGCCTGTGT TCTTGGCGCA
GAACATGTTA GAAAATCTCA TCCTGAATGG TATGACCAAT GGTGGGGTGG ACAAGAAAAG
GTAGTAGTCA AAGTTTCTGG AATAAAGGAT TTGCAAGAAG TAAAGAAACA TGCAATTGAT
CTGAATCTAC CTTGGTCTGA AGTTACTGAT GCAGGTCATA CTCAGATTGC TCCTGGAACT
ACAACCTGTA TTTCAATTGG TCCTGCTCCT GAAAATCTGA TTGATAGAGT AACTGGTGAC
TTGAAGTTAC TTTAG
 
Protein sequence
MPVFDNSMGD IKQVIVVRTD LEMGKGKIAA QVGHACVLGA EHVRKSHPEW YDQWWGGQEK 
VVVKVSGIKD LQEVKKHAID LNLPWSEVTD AGHTQIAPGT TTCISIGPAP ENLIDRVTGD
LKLL