Gene Nmar_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_1199 
Symbol 
ID5773342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp1093614 
End bp1095215 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content36% 
IMG OID641316843 
Producthypothetical protein 
Protein accessionYP_001582533 
Protein GI161528707 
COG category[V] Defense mechanisms 
COG ID[COG4257] Streptogramin lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAC GGACCAAAGG AATTTTGGCT TTTGTATTTT TAGGTGGAAT AATGGTTACT 
TCTGGTGTTA CAATTGCAAT TCCTGGACTT TCTCCTGATG AGGAAAGTCC TGAAATGACA
ATAACTGGAA CTCCTGCAGA TAATTTTCCT GATGCAGAAC GTCCTAGGTT TTGTGGTTCT
GGAGATGCCC AGTCGACTAA TTTTGTAACA GAATATTCTA TTCCAACTGA GTGTACTAAT
CCTTTAGCAG TTGTTACTGA TTATGATGGA AATGTTTGGT TTGCACAAAC TAATACTGGA
AAATTATCAA AATTTGATCC TAACACTGAA TCATTTACTG AATATGAAAA CCCTACATGG
CCAAAAAATC AACGTTCCAT GATGTGGGGA ATTGATTATG CTCCTGACGG TTCTGTGTGG
TTTACTGATG AGACATTTGA TTCTATTTGG AAATTCAATA CATTTGATGA AAAATATGAT
CGAATTGGAT ATCCCTCTGC AGATGATTCG CTGCCTCAAA GACTTCAGAT TGATGGCTCT
CGTATAATCA TTAATGATTT TACTGGAAAC AAACTAACAT TCTTTGATAT TACTCAATCC
TCAGGAGATG TTGAATACAT CAGCCTACCT TCTCCTGTTG ATAATTCTGT AACTGCTGAT
TTTACTTTAG ATGAAGATGG TAATGTGTGG TATACAAATT GGTTGTTCCA ACAGGGCGGA
GTTTTAGTAA AATTTGATTA TGATGGTTAT AGAAATGAAG TTCAAGAATC TGGACAAGAA
TTCTTTGCAG GAGAAATGTT TACAGAAATT TATCAATTGC CTGTCACATT ATTGACTCCA
AATGGAGCTG TATTTGATGA TGGAAAAATT TGGTTAGCCG ATACAACTTC CTCATCTTTC
TTTAGCTTTG ATCCAATTAC TGAAGAATTT GTACAATATG TCACAGCAGA TCCATTACTT
AGCACATATG GAAACCAAAC CGGCGTAATC AAATCTCCTA TTTCTAGACC ATATTGGATT
GATTCTGATG AACAAGGAAG AATTATCTTC AATGAACAAA ATGCAAATAA CATATCTGTA
TTTGATCCAA AATCAAACTC TCTGGTAGAA TATCACGTCC CTTCAAAGAA TCCTTATTGG
GGGGATTGTG ATCCTGGAAC TGGTTTAATG TTAGCTGACT GCGGATTAGC TCAAATCTTT
GACTTTGCTG TAGATGGTGA AAAAATTTGG TTTACTCAAT GGGTTGAAAA TAACATCGGT
GTAGTTGATA CTTCTGTTCC ACTACCTGTT GAAATCCAAT TAGAATCAGA AATGATTTCT
CTAAGTCCAG GCGATTCAAA ACATTTCAAC TTTATTGTAT CTCCAAAATC AAATAACACG
TTAGGCGGCT CTTTGATTCT AACTAGTTCT CATGACTTTT TGAGTGTGGA ACTCTCACAC
GATAGTCCTG ATTCTTTCCA ATTGGTTTCT GGTACATCTC AACCAATTCA TACGAATATT
TCTGCATCTG GTGATGCAAT TCCTGGAAAA TATAATGTTC TAATTGGAAT ACAATTATCT
GATATTGCGG TTAGCAAATA TGTTACAGTG ACAGTAGAGT GA
 
Protein sequence
MKKRTKGILA FVFLGGIMVT SGVTIAIPGL SPDEESPEMT ITGTPADNFP DAERPRFCGS 
GDAQSTNFVT EYSIPTECTN PLAVVTDYDG NVWFAQTNTG KLSKFDPNTE SFTEYENPTW
PKNQRSMMWG IDYAPDGSVW FTDETFDSIW KFNTFDEKYD RIGYPSADDS LPQRLQIDGS
RIIINDFTGN KLTFFDITQS SGDVEYISLP SPVDNSVTAD FTLDEDGNVW YTNWLFQQGG
VLVKFDYDGY RNEVQESGQE FFAGEMFTEI YQLPVTLLTP NGAVFDDGKI WLADTTSSSF
FSFDPITEEF VQYVTADPLL STYGNQTGVI KSPISRPYWI DSDEQGRIIF NEQNANNISV
FDPKSNSLVE YHVPSKNPYW GDCDPGTGLM LADCGLAQIF DFAVDGEKIW FTQWVENNIG
VVDTSVPLPV EIQLESEMIS LSPGDSKHFN FIVSPKSNNT LGGSLILTSS HDFLSVELSH
DSPDSFQLVS GTSQPIHTNI SASGDAIPGK YNVLIGIQLS DIAVSKYVTV TVE