Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_1191 |
Symbol | |
ID | 5773787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 1086413 |
End bp | 1088440 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641316835 |
Product | hypothetical protein |
Protein accession | YP_001582525 |
Protein GI | 161528699 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAGAAA ATAATCTTAT TCATGAAACA AGTCCTTATC TTCTTCAACA TGCTCATAAT CCAGTTGACT GGTATGGTTG GAATGATGAA GCATTAAAAA AAGCAAAAGA TGAAAACAAA CCGATCTTTC TTAGTATTGG TTACAGTTCT TGTCATTGGT GCCATGTTAT GGCACATGAA TCATTTGAAA ATGAAGAAGT TGCAAAATTC ATGAATGAAA ATTTTGTAAA TATCAAAGTA GATAGAGAAG AACGCCCTGA CATTGATGAC ATTTATCAAA AAGCTTGTCA GATAGCTACT GGTCAAGGAG GATGGCCTTT GAGTATTTTC TTAACTCCTG ATCAAAAACC ATTCTATGTT GGAACTTATT TTCCAATTCT GGATTCTTAC GGTCGTCCGG GATTTGGGAG TATATGCAGA CAACTATCTC AAGCTTGGAA AGAAAAACCT AAAGACATTG AAAAATCTGC AGATAATTTT CTTGATGCAC TAAATAAAAC TGAAAAAGTT TCTATTTCTT CAAAATTAGA AAGAACCATT CTTGATGAGG CAGCAATGAA TCTTTTCCAA CTGGGTGATT CTGCTTATGG TGGATTTGGT TCTGCTCCAA AATTTCCAAA CGCTGCTAAT GTTTCCTTTT TGTTTCGTTA TGCAAAGATA TCTGGGTTGT CAAAATTCAC AGAATTTGGG CTCAAAACTC TCAAAAAAAT GGCAAATGGT GGAATATTTG ATCAAATTGG TGGTGGATTT CATCGATATT CTACAGATGC AAAATGGCTT GTACCTCACT TTGAAAAAAT GCTCTATGAT AACGCACTAA TTCCTGTAAA TTATGCTGAG GCATTTCAGA TAACAAAGGA TCCTTTCTAT CTAGATGTCT TGAAAAAAAC CCTTGATTTT GTTTTGCGTG AAATGACTTC TCCTGAAGGT GGTTTCTATT CTGCATATGA TGCAGACTCT GAAGGTGTAG AGGGAAAATT CTATGTCTGG AAGAAAAGCG AGATTAAAGA AATTCTTGGT GATGATGCTG ACATCTTTTG CTTATTTTAT GATGCCACTG ATGGTGGAAA CTGGGAAGGA AACAACATTT TGTGTAATAA CTTGAATATC TCTACAGTTG CCTTTAATTT TGGAACTACT GAAGAAAAGG TTAGAGAAAT TCTTCAGGCC TGTTCTAAAA AGTTACTTGA TGTTCGTTCC AAGAGAGTTG CCCCTGGACT GGATGATAAA ATTCTAGTTT CGTGGAATTC TTTAATGATT ACTGCCTTTG CTAAGGGTTA TCGTGTAACA AATGAATCTA GATATCTTGA TGCTGCAAAA GATTGTATCT CCTTTATTGA AAATAATTTG TTTTCAGGAG ACAAGTTACT ACGAACTTAT AAAAACAAAA CTGCAAAAAT TGATGGCTAT CTAGAAGACT ATTCTTATTT TGTAAATTGC TTGTTAGATG TATTTGAAAT TGAACCTGAT CCAAAATATC TAAAACTTGC ACTAAAACTA GGCCATCACT TGGTGGAACA TTTCTGGGAT TCAGAAAACA ATAGTTTCTT TATGACTTCA GACAATCATG AAAAACTGAT TATACGACCC AAAAGCAATT ATGATTTGTC TTTGCCTTCT GGAAACTCTG TTTCTGCATT TGTCATGCTC AGACTATTCC ATTTCTCTCA AGAACAACAA TTCTTAGATA TTGCTACAAA AATCATGGAA TCTCAGGCAC AAATGGCTGC TGAAAATCCA TTTGGATTTG GATATCTGCT AAACACAATT TCAATTTATT TGGAAAAACC TGTTGAAATC ACAATCATAA ACACTGAAAA TTCTCAACTT TGTGACTCAA TTCTTTTGGA ATATTTACCA AACTCAATTG TTGTCACTAT TCAAAATTCT ACTCAGTTGT CGGCTCTATC TGAATATCCT TTCTTTGCTG GAAAATCTTT TGAAGAAAAA ACATCTGCAT TTGTTTGTAA AAACTTTACT TGTTCATTAC CTTTGCATAC TATTGATGAA ATAAACTCAC ATCTTTAG
|
Protein sequence | MTENNLIHET SPYLLQHAHN PVDWYGWNDE ALKKAKDENK PIFLSIGYSS CHWCHVMAHE SFENEEVAKF MNENFVNIKV DREERPDIDD IYQKACQIAT GQGGWPLSIF LTPDQKPFYV GTYFPILDSY GRPGFGSICR QLSQAWKEKP KDIEKSADNF LDALNKTEKV SISSKLERTI LDEAAMNLFQ LGDSAYGGFG SAPKFPNAAN VSFLFRYAKI SGLSKFTEFG LKTLKKMANG GIFDQIGGGF HRYSTDAKWL VPHFEKMLYD NALIPVNYAE AFQITKDPFY LDVLKKTLDF VLREMTSPEG GFYSAYDADS EGVEGKFYVW KKSEIKEILG DDADIFCLFY DATDGGNWEG NNILCNNLNI STVAFNFGTT EEKVREILQA CSKKLLDVRS KRVAPGLDDK ILVSWNSLMI TAFAKGYRVT NESRYLDAAK DCISFIENNL FSGDKLLRTY KNKTAKIDGY LEDYSYFVNC LLDVFEIEPD PKYLKLALKL GHHLVEHFWD SENNSFFMTS DNHEKLIIRP KSNYDLSLPS GNSVSAFVML RLFHFSQEQQ FLDIATKIME SQAQMAAENP FGFGYLLNTI SIYLEKPVEI TIINTENSQL CDSILLEYLP NSIVVTIQNS TQLSALSEYP FFAGKSFEEK TSAFVCKNFT CSLPLHTIDE INSHL
|
| |